RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 THBS3P49746 956 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 GNG4P50150 75 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 RPS16P62249 146 aaKnown RBP13.12□□□□□ -0.31
SF3A2-201ENST00000221494 PRR20EP86478 221 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 PRR20CP86479 221 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 PRR20DP86480 221 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 PRR20BP86481 221 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 PRR20AP86496 221 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 RELBQ01201 579 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 OR5I1Q13606 314 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 SMIM21Q3B7S5 101 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 OR5B3Q8NH48 314 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 MRGPRDQ8TDS7 321 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 NRN1Q9NPD7 142 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 TBL2Q9Y4P3 447 aaKnown RBP13.12□□□□□ -0.31
SF3A2-201ENST00000221494 SLC17A3O00476 420 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 PMCHL1Q16048 86 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 CR1LQ2VPA4 569 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 SPINK9Q5DT21 86 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 STPG3Q8N7X2 389 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 TRIB1Q96RU8 372 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 NAT8BQ9UHF3 227 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 IGF2RP11717 2491 aa13.12□□□□□ -0.31
SF3A2-201ENST00000221494 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
SF3A2-201ENST00000221494 GRPP07492 148 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 IGLC2P0DOY2 106 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 CHRNB4P30926 498 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 APOBEC3AP31941 199 aaPredicted RBP13.11□□□□□ -0.31
SF3A2-201ENST00000221494 MZT1Q08AG7 82 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 TIGITQ495A1 244 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 SPATA45Q537H7 98 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 SLC25A40Q8TBP6 338 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
SF3A2-201ENST00000221494 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 COMMD5Q9GZQ3 224 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 TCF19Q9Y242 345 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
SF3A2-201ENST00000221494 HELTA6NFD8 242 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 FCGR3BO75015 233 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 BMP5P22003 454 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 AMTP48728 403 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 UCNP55089 124 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 KRTDAPP60985 99 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 GUSBP1Q15486 140 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 PQLC2Q6ZP29 291 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 FAM90A1Q86YD7 464 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 C11orf53Q8IXP5 236 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 OR8I2Q8N0Y5 310 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 RAB9BQ9NP90 201 aa13.11□□□□□ -0.31
SF3A2-201ENST00000221494 FOXA2Q9Y261 457 aaPredicted RBP13.11□□□□□ -0.31
SF3A2-201ENST00000221494 SMIM27A0A1W2PRY6 76 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 C15orf61A6NNL5 157 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 SIAH2O43255 324 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 CENPWQ5EE01 88 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.1□□□□□ -0.31
SF3A2-201ENST00000221494 ST6GALNAC3Q8NDV1 305 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 OR13A1Q8NGR1 328 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 OR4S2Q8NH73 311 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 C1orf159Q96HA4 380 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 PLSCR4Q9NRQ2 329 aa13.1□□□□□ -0.31
SF3A2-201ENST00000221494 A0A1W2PS18 150 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 NPY1RP25929 384 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
SF3A2-201ENST00000221494 TECRQ9NZ01 308 aaKnown RBP13.09□□□□□ -0.31
SF3A2-201ENST00000221494 CDC42EP3Q9UKI2 254 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 LAMTOR2Q9Y2Q5 125 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 DIDO1Q9BTC0 2240 aaKnown RBP13.09□□□□□ -0.31
SF3A2-201ENST00000221494 HYPMO75409 117 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 CD33P20138 364 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 SSTR5P35346 364 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 HNRNPA3P51991 378 aaKnown RBP13.09□□□□□ -0.31
SF3A2-201ENST00000221494 TAS2R45P59539 299 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 WDR82Q6UXN9 313 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 FAM214BQ7L5A3 538 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 C11orf42Q8N5U0 333 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 Q8NA96 180 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 C9orf106Q8NAJ2 232 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 OR2D3Q8NGH3 330 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 PPP1R35Q8TAP8 253 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 S1PR3Q99500 378 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 DNAJC4Q9NNZ3 241 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 OBP2BQ9NPH6 170 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 ZNF71Q9NQZ8 489 aaPredicted RBP13.09□□□□□ -0.31
SF3A2-201ENST00000221494 TMEM140Q9NV12 185 aa13.09□□□□□ -0.31
SF3A2-201ENST00000221494 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.31
SF3A2-201ENST00000221494 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.32
SF3A2-201ENST00000221494 A0A1W2PRE2 83 aa13.08□□□□□ -0.32
SF3A2-201ENST00000221494 F2RL2O00254 374 aa13.08□□□□□ -0.32
SF3A2-201ENST00000221494 HSPE1P61604 102 aaKnown RBP13.08□□□□□ -0.32
SF3A2-201ENST00000221494 POU2AF1Q16633 256 aa13.08□□□□□ -0.32
SF3A2-201ENST00000221494 MORN2Q502X0 79 aa13.08□□□□□ -0.32
SF3A2-201ENST00000221494 DDB2Q92466 427 aa13.08□□□□□ -0.32
SF3A2-201ENST00000221494 ENY2Q9NPA8 101 aa13.08□□□□□ -0.32
SF3A2-201ENST00000221494 BSNQ9UPA5 3926 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms