RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 RTBDNQ9BSG5 229 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-227ENST00000641811 HINT2Q9BX68 163 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 COPZ2Q9P299 210 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 OR51B2Q9Y5P1 312 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 S4R3C0 116 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 H0Y980 276 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 SAP30O75446 220 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 IGHV3-23P01764 117 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 FGF2P09038 288 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 IZUMO4Q1ZYL8 232 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 H2BFWTQ7Z2G1 175 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 CADM3Q8N126 398 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 OR1L8Q8NGR8 309 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 NDUFA4L2Q9NRX3 87 aa13.28□□□□□ -0.28
PHGDH-227ENST00000641811 IGKV1-5P01602 117 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 OR13C7P0DN81 318 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 DEFA4P12838 97 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 ZP3P21754 424 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 ECI1P42126 302 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 WT1-ASQ06250 92 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 KLF5Q13887 457 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-227ENST00000641811 ACSM6Q6P461 480 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 Q8N402 240 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 CCDC71LQ8N9Z2 235 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 TRIM63Q969Q1 353 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 PRRT1Q99946 306 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 C5orf66Q9H5L9 145 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 MCUBQ9NWR8 336 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 PRNDQ9UKY0 176 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 C14orf166Q9Y224 244 aaKnown RBP13.27□□□□□ -0.29
PHGDH-227ENST00000641811 DMRT1Q9Y5R6 373 aa13.27□□□□□ -0.29
PHGDH-227ENST00000641811 IGLV11-55A0A075B6I3 123 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.26□□□□□ -0.29
PHGDH-227ENST00000641811 C15orf61A6NNL5 157 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 BMPR1BO00238 502 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 DHFRP00374 187 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 SYNJ2BPP57105 145 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 KLF9Q13886 244 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-227ENST00000641811 KLK9Q2XQG4 91 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 PRR25Q96S07 402 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 TSC22D3Q99576 134 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 SRSF8Q9BRL6 282 aaKnown RBP13.26□□□□□ -0.29
PHGDH-227ENST00000641811 TMEM14BQ9NUH8 114 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 KLK9Q9UKQ9 250 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 GPR132Q9UNW8 380 aa13.26□□□□□ -0.29
PHGDH-227ENST00000641811 PPP5D1E7EU14 171 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 INSL3P51460 131 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 SURF2Q15527 256 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-227ENST00000641811 RPEL1Q2QD12 228 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 TRIM16LQ309B1 348 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 DEFB121Q5J5C9 76 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 HAPLN4Q86UW8 402 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 ZNF429Q86V71 674 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 OR6Q1Q8NGQ2 317 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 OR4A16Q8NH70 328 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 SLC2A8Q9NY64 477 aa13.25□□□□□ -0.29
PHGDH-227ENST00000641811 TEX13DA0A0J9YY54 714 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-227ENST00000641811 MFSD2BA6NFX1 497 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 HLA-AP01891 365 aaKnown RBP13.24□□□□□ -0.29
PHGDH-227ENST00000641811 OR5AC1P0C628 307 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 P0C879 139 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 HIST1H1BP16401 226 aaKnown RBP13.24□□□□□ -0.29
PHGDH-227ENST00000641811 UCP1P25874 307 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 MFAP2P55001 183 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 THOC7Q6I9Y2 204 aaKnown RBP13.24□□□□□ -0.29
PHGDH-227ENST00000641811 TOMM5Q8N4H5 51 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 GDPD1Q8N9F7 314 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 OR5B3Q8NH48 314 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 LSM10Q969L4 123 aaKnown RBP13.24□□□□□ -0.29
PHGDH-227ENST00000641811 CCDC140Q96MF4 163 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 NAA60Q9H7X0 242 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 FKBP11Q9NYL4 201 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 SCP2D1Q9UJQ7 156 aa13.24□□□□□ -0.29
PHGDH-227ENST00000641811 ETV6P41212 452 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 MECP2P51608 486 aaKnown RBP13.23□□□□□ -0.29
PHGDH-227ENST00000641811 AKR1C2P52895 323 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 CLEC19AQ6UXS0 136 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 IL34Q6ZMJ4 242 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 LHFPL5Q8TAF8 219 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 GLYATL2Q8WU03 294 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 OR4C12Q96R67 309 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 ELOVL1Q9BW60 279 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
PHGDH-227ENST00000641811 ZMAT5Q9UDW3 170 aaKnown RBP13.23□□□□□ -0.29
PHGDH-227ENST00000641811 A0A0B4J293 547 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 A0A0G2JRQ6 117 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 CRYM-AS1A6NIL9 109 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 SPINK9Q5DT21 86 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 SLC25A24Q6NUK1 477 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 HSD17B13Q7Z5P4 300 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-227ENST00000641811 OR9G4Q8NGQ1 327 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 TMEM230Q96A57 120 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 EEF1AKMT3Q96AZ1 226 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 TMEM56Q96MV1 263 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 SRRQ9GZT4 340 aa13.22□□□□□ -0.29
PHGDH-227ENST00000641811 ZNF256Q9Y2P7 627 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-227ENST00000641811 IGHV3-21A0A0B4J1V1 117 aa13.21□□□□□ -0.29
PHGDH-227ENST00000641811 OR2C1O95371 312 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms