RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	ACTL10	Q5JWF8	245 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	OR4P4	Q8NGL7	312 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	SGMS2	Q8NHU3	365 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	LRFN3	Q9BTN0	628 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	TMEM14B	Q9NUH8	114 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	ASH1L	Q9NR48	2969 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	TRGV10	A0A0A0MS01	117 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	CCL3L1	P16619	93 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	NDUFB7	P17568	137 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	GPX4	P36969	197 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	ZNF439	Q8NDP4	499 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	OR52E5	Q8NH55	327 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	ANAPC16	Q96DE5	110 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	OR51B2	Q9Y5P1	312 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597		K7EN84	100 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	PDE6D	O43924	150 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	SNRPC	P09234	159 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	CT45A6	P0DMU7	189 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	CT45A5	P0DMU8	189 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	CT45A7	P0DMV0	189 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	RPL31	P62899	125 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	DIAPH2-AS1	Q14236	149 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	TMEM256	Q8N2U0	113 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	RAB1C	Q92928	201 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	NPVF	Q9HCQ7	196 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	KCNIP2	Q9NS61	270 aa		13.76	□□□□□ -0.21
PHGDH-223	ENST00000641597	VENTX	O95231	258 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	GCHFR	P30047	84 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	TMPRSS3	P57727	454 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	HSPE1	P61604	102 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	PRB3	Q04118	309 aa	Predicted RBP	13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	IMMP2L	Q96T52	175 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597		E7EUB6	86 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	CD33	P20138	364 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	CD40	P25942	277 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	TIMP3	P35625	211 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	OR5I1	Q13606	314 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	C1orf185	Q5T7R7	199 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	TEPP	Q6URK8	271 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	SFRP2	Q96HF1	295 aa		13.75	□□□□□ -0.21
PHGDH-223	ENST00000641597	GRIFIN	A4D1Z8	144 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	RPP30	P78346	268 aa	Known RBP	13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	FAM169B	Q8N8A8	192 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	C14orf144	Q96I85	54 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	FAM90A9P	A6NNJ1	464 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597		F6UZH7	168 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597		J3QR06	171 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	TGOLN2	O43493	480 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	MPDU1	O75352	247 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	CXorf1	O96002	111 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	DLX1	P56177	255 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	WFDC8	Q8IUA0	241 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	OR9G1	Q8NH87	305 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	FAM222B	Q8WU58	562 aa		13.74	□□□□□ -0.21
PHGDH-223	ENST00000641597	SPTA1	P02549	2419 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	OR10J4	P0C629	311 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	LINC00869	P0C866	280 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	RPL15	P61313	204 aa	Known RBP	13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	FOXA2	Q9Y261	457 aa	Predicted RBP	13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	RAB7A	P51149	207 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	DEFA6	Q01524	100 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	ZNF788	Q6ZQV5	615 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597		Q6ZS92	163 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	TMEM144	Q7Z5S9	345 aa		13.73	□□□□□ -0.21
PHGDH-223	ENST00000641597	TRGV8	A0A0C4DH27	118 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597		A8MXE2	369 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	KLK10	O43240	276 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	SRP14	P37108	136 aa	Known RBP	13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	C10orf55	Q5SWW7	151 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	MORN5	Q5VZ52	161 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	ENY2	Q9NPA8	101 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	TRAPPC1	Q9Y5R8	145 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	SPINK4	O60575	86 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	OR4A8	P0C604	315 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	CBLN1	P23435	193 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	GATA4	P43694	442 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	SSBP2	P81877	361 aa	Predicted RBP	13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	TEX38	Q6PEX7	206 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	MRPL20	Q9BYC9	149 aa	Known RBP	13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	SLC35D1	Q9NTN3	355 aa		13.72	□□□□□ -0.21
PHGDH-223	ENST00000641597	SAA1	P0DJI8	122 aa	Predicted RBP	13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	CHRNB4	P30926	498 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	JOSD1	Q15040	202 aa	Predicted RBP	13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	PSG5	Q15238	335 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	KCNIP4	Q6PIL6	250 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	LHFPL4	Q7Z7J7	247 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	ZNF503	Q96F45	646 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	ELOVL5	Q9NYP7	299 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	IL19	Q9UHD0	177 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	ABCA4	P78363	2273 aa		13.71	□□□□□ -0.21
PHGDH-223	ENST00000641597	TEX50	A0A1B0GTY4	177 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRR20E	P86478	221 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRR20C	P86479	221 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRR20D	P86480	221 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRR20B	P86481	221 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	PRR20A	P86496	221 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	ZNF664	Q8N3J9	261 aa		13.71	□□□□□ -0.22
PHGDH-223	ENST00000641597	PLEKHA3	Q9HB20	300 aa		13.71	□□□□□ -0.22

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