RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TRBV12-3P01733 135 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 HSPB1P04792 205 aaKnown RBP20.55■□□□□ 0.88
VEGFA-231ENST00000640499 AP3S2P59780 193 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 WT1-ASQ06250 92 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 SLC25A42Q86VD7 318 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 OR1L8Q8NGR8 309 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 DCUN1D4Q92564 292 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 USMG5Q96IX5 58 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 QTRT1Q9BXR0 403 aaKnown RBP20.55■□□□□ 0.88
VEGFA-231ENST00000640499 A0A0G2JRQ6 117 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 TEX13DA0A0J9YY54 714 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-231ENST00000640499 C15orf61A6NNL5 157 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 LINC01619G3V211 115 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 SNAPC5O75971 98 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 OR2J3O76001 311 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 CDS2O95674 445 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 OR8U8P0C7N1 319 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 TRAPPC2P0DI81 140 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 TRAPPC2BP0DI82 140 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 H2BFWTQ7Z2G1 175 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 DPF1Q92782 380 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 DLX4Q92988 240 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-231ENST00000640499 SRSF8Q9BRL6 282 aaKnown RBP20.54■□□□□ 0.88
VEGFA-231ENST00000640499 TMEM222Q9H0R3 208 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 PRNDQ9UKY0 176 aa20.54■□□□□ 0.88
VEGFA-231ENST00000640499 PRKDCP78527 4128 aaKnown RBP20.53■□□□□ 0.88
VEGFA-231ENST00000640499 ANKRD34BA5PLL1 514 aa20.53■□□□□ 0.88
VEGFA-231ENST00000640499 NDUFB8O95169 186 aa20.53■□□□□ 0.88
VEGFA-231ENST00000640499 FAUP35544 74 aaKnown RBP20.53■□□□□ 0.88
VEGFA-231ENST00000640499 SUPT4H1P63272 117 aaKnown RBP20.53■□□□□ 0.88
VEGFA-231ENST00000640499 NECAP1Q8NC96 275 aa20.53■□□□□ 0.88
VEGFA-231ENST00000640499 DEDD2Q8WXF8 326 aa20.53■□□□□ 0.88
VEGFA-231ENST00000640499 A0A0B4J293 547 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 FAM223BA6NKX1 122 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 B3GALNT1O75752 331 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 DUS4LO95620 317 aaKnown RBP20.52■□□□□ 0.88
VEGFA-231ENST00000640499 PRB2P02812 416 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-231ENST00000640499 KRTAP10-11P60412 298 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 TRIM16LQ309B1 348 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 ZNF57Q68EA5 555 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-231ENST00000640499 FAM223AQ8IWN6 122 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 SELENOHQ8IZQ5 122 aaKnown RBP20.52■□□□□ 0.88
VEGFA-231ENST00000640499 TSC22D3Q99576 134 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 PRR13Q9NZ81 148 aa20.52■□□□□ 0.88
VEGFA-231ENST00000640499 IGLV11-55A0A075B6I3 123 aa20.51■□□□□ 0.87
VEGFA-231ENST00000640499 Q6ZRM9 215 aa20.51■□□□□ 0.87
VEGFA-231ENST00000640499 OR5B3Q8NH48 314 aa20.51■□□□□ 0.87
VEGFA-231ENST00000640499 FBXL7Q9UJT9 491 aa20.51■□□□□ 0.87
VEGFA-231ENST00000640499 WIPF1O43516 503 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 OR13C7P0DN81 318 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 HOXD3P31249 432 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-231ENST00000640499 MFAP2P55001 183 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 ATP5G2Q06055 141 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 TMEM187Q14656 261 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 C15orf32Q32M92 178 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 THOC7Q6I9Y2 204 aaKnown RBP20.5■□□□□ 0.87
VEGFA-231ENST00000640499 GALNT14Q96FL9 552 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 SCGB3A2Q96PL1 93 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 HINT2Q9BX68 163 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 FKBP11Q9NYL4 201 aa20.5■□□□□ 0.87
VEGFA-231ENST00000640499 IL7P13232 177 aa20.49■□□□□ 0.87
VEGFA-231ENST00000640499 EGFEM1PQ0D2K5 195 aa20.49■□□□□ 0.87
VEGFA-231ENST00000640499 OR4A16Q8NH70 328 aa20.49■□□□□ 0.87
VEGFA-231ENST00000640499 TMEM56Q96MV1 263 aa20.49■□□□□ 0.87
VEGFA-231ENST00000640499 MCRIP2Q9BUT9 160 aaKnown RBP20.49■□□□□ 0.87
VEGFA-231ENST00000640499 RANGRFQ9HD47 186 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-231ENST00000640499 PEF1Q9UBV8 284 aaKnown RBP20.49■□□□□ 0.87
VEGFA-231ENST00000640499 TMEM56-RWDD3S4R434 201 aa20.49■□□□□ 0.87
VEGFA-231ENST00000640499 AKR1C4P17516 323 aa20.48■□□□□ 0.87
VEGFA-231ENST00000640499 CCR6P51684 374 aa20.48■□□□□ 0.87
VEGFA-231ENST00000640499 DHODHQ02127 395 aa20.48■□□□□ 0.87
VEGFA-231ENST00000640499 EXOSC2Q13868 293 aaKnown RBP20.48■□□□□ 0.87
VEGFA-231ENST00000640499 ZNF429Q86V71 674 aa20.48■□□□□ 0.87
VEGFA-231ENST00000640499 LSM10Q969L4 123 aaKnown RBP20.48■□□□□ 0.87
VEGFA-231ENST00000640499 S4R3C0 116 aa20.48■□□□□ 0.87
VEGFA-231ENST00000640499 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.47■□□□□ 0.87
VEGFA-231ENST00000640499 OVOL1O14753 267 aa20.47■□□□□ 0.87
VEGFA-231ENST00000640499 BTCP35070 178 aa20.47■□□□□ 0.87
VEGFA-231ENST00000640499 HSPE1P61604 102 aaKnown RBP20.47■□□□□ 0.87
VEGFA-231ENST00000640499 TRIQKQ629K1 86 aa20.47■□□□□ 0.87
VEGFA-231ENST00000640499 SGPP2Q8IWX5 399 aa20.47■□□□□ 0.87
VEGFA-231ENST00000640499 SLC25A21Q9BQT8 299 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-231ENST00000640499 LINC00854A0A1B0GVQ3 168 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 SEC14L6B5MCN3 397 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 IGHV3-23P01764 117 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 AKR1C2P52895 323 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 PRCDQ00LT1 54 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 KLF5Q13887 457 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-231ENST00000640499 TMEM268Q5VZI3 342 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 HSD17B13Q7Z5P4 300 aaPredicted RBP20.46■□□□□ 0.87
VEGFA-231ENST00000640499 RBPMSQ93062 196 aaKnown RBP20.46■□□□□ 0.87
VEGFA-231ENST00000640499 GPR146Q96CH1 333 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 CCDC140Q96MF4 163 aa20.46■□□□□ 0.87
VEGFA-231ENST00000640499 MFSD2BA6NFX1 497 aa20.45■□□□□ 0.86
VEGFA-231ENST00000640499 BMPR1BO00238 502 aa20.45■□□□□ 0.86
VEGFA-231ENST00000640499 PLA2G10O15496 165 aa20.45■□□□□ 0.86
VEGFA-231ENST00000640499 ST8SIA3O43173 380 aa20.45■□□□□ 0.86
VEGFA-231ENST00000640499 DHFRP00374 187 aa20.45■□□□□ 0.86
VEGFA-231ENST00000640499 DEFA4P12838 97 aa20.45■□□□□ 0.86
VEGFA-231ENST00000640499 HIST1H1BP16401 226 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms