RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 ZNF355PQ9NSJ1 428 aa12.54□□□□□ -0.4
CACNA1A-229ENST00000636670 PRNDQ9UKY0 176 aa12.54□□□□□ -0.4
CACNA1A-229ENST00000636670 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 TEX13DA0A0J9YY54 714 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 HMX3A6NHT5 357 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 CGB1A6NKQ9 187 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 E7EUB6 86 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 CCL24O00175 119 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 MYOD1P15172 320 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 CD33P20138 364 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 AKR1C2P52895 323 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 DEFB136Q30KP8 78 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 H2BFWTQ7Z2G1 175 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 HSD17B13Q7Z5P4 300 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 OR5B3Q8NH48 314 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 S100ZQ8WXG8 99 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 TMEM230Q96A57 120 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 GALNT14Q96FL9 552 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 MS4A10Q96PG2 267 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 C7orf50Q9BRJ6 194 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 QTRT1Q9BXR0 403 aaKnown RBP12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 FKBP11Q9NYL4 201 aa12.53□□□□□ -0.4
CACNA1A-229ENST00000636670 LCE6AA0A183 80 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 FAM223BA6NKX1 122 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 CRYGCP07315 174 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 P0C879 139 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 DHODHQ02127 395 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 RBMS2Q15434 407 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 SGPP2Q8IWX5 399 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 MRPL41Q8IXM3 137 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 OR1L8Q8NGR8 309 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 RCC1LQ96I51 464 aaKnown RBP12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 CCDC32Q9BV29 185 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 TMEM14BQ9NUH8 114 aa12.52□□□□□ -0.41
CACNA1A-229ENST00000636670 TRBV9A0A0B4J1U6 114 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 C13orf42A0A1B0GVH6 325 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 IGLC7A0M8Q6 106 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 DHFRP00374 187 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 IGKV1-5P01602 117 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 OR8U8P0C7N1 319 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 AREGP15514 252 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 CTRB1P17538 263 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 PSMB6P28072 239 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 ZNF616Q08AN1 781 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 SP6Q3SY56 376 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 CTRB2Q6GPI1 263 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 FAM219AQ8IW50 185 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 GLYATL2Q8WU03 294 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 RBPMSQ93062 196 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 LSM10Q969L4 123 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 DUX3Q96PT4 197 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 NSG2Q9Y328 171 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 HYDINQ4G0P3 5121 aa12.51□□□□□ -0.41
CACNA1A-229ENST00000636670 CENPXA8MT69 81 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 DUS4LO95620 317 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 CDS2O95674 445 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 IGHV3-11P01762 117 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 TRAPPC2P0DI81 140 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 TRAPPC2BP0DI82 140 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 DCTN2Q13561 401 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 KLK9Q2XQG4 91 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 OR11H1Q8NG94 326 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 OR4A16Q8NH70 328 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 IL22RA2Q969J5 263 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 OR5B12Q96R08 314 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 GPR61Q9BZJ8 451 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 NDUFA4L2Q9NRX3 87 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 KLK9Q9UKQ9 250 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 KCNIP3Q9Y2W7 256 aa12.5□□□□□ -0.41
CACNA1A-229ENST00000636670 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 TEX50A0A1B0GTY4 177 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 ANXA3P12429 323 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 SRPXP78539 464 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 RHOGP84095 191 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 FAM209BQ5JX69 171 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 ZNF429Q86V71 674 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 NECAP1Q8NC96 275 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 OR1N2Q8NGR9 330 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 LHFPL5Q8TAF8 219 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 RRNAD1Q96FB5 475 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 TMEM56Q96MV1 263 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 WDR12Q9GZL7 423 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 TMEM56-RWDD3S4R434 201 aa12.49□□□□□ -0.41
CACNA1A-229ENST00000636670 DBX1A6NMT0 343 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 LINC01619G3V211 115 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 NDUFB6O95139 128 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 PRH1P02810 166 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 AKR1C4P17516 323 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 BTCP35070 178 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 SUPT4H1P63272 117 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 DEFA5Q01523 94 aa12.48□□□□□ -0.41
CACNA1A-229ENST00000636670 EXOSC2Q13868 293 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms