RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 UXS1Q8NBZ7 420 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 GLYATL2Q8WU03 294 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 TMEM230Q96A57 120 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 FYTTD1Q96QD9 318 aaKnown RBP7.55□□□□□ -1.2
LINC00339-210ENST00000635675 COMMD5Q9GZQ3 224 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 TMEM222Q9H0R3 208 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 NAA60Q9H7X0 242 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 ZNF355PQ9NSJ1 428 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 PRR13Q9NZ81 148 aa7.55□□□□□ -1.2
LINC00339-210ENST00000635675 TEX13DA0A0J9YY54 714 aaPredicted RBP7.54□□□□□ -1.2
LINC00339-210ENST00000635675 CRYM-AS1A6NIL9 109 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 CCL24O00175 119 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 SSNA1O43805 119 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 RBMXL2O75526 392 aaKnown RBP7.54□□□□□ -1.2
LINC00339-210ENST00000635675 SNAPC5O75971 98 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 CDS2O95674 445 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 IGKV1-5P01602 117 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 PF4P02776 101 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 TRGV3P03979 118 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 CRYGCP07315 174 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 OR5AC1P0C628 307 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 P0C879 139 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 VAMP1P23763 118 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 TPPP2P59282 170 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 DEFB136Q30KP8 78 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 H2BFWTQ7Z2G1 175 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 MRPL41Q8IXM3 137 aaKnown RBP7.54□□□□□ -1.2
LINC00339-210ENST00000635675 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 DUX3Q96PT4 197 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 SLC25A21Q9BQT8 299 aaPredicted RBP7.54□□□□□ -1.2
LINC00339-210ENST00000635675 COA4Q9NYJ1 87 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 NSG2Q9Y328 171 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 NOTCH1P46531 2555 aa7.54□□□□□ -1.2
LINC00339-210ENST00000635675 TRBV9A0A0B4J1U6 114 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 A0A0G2JLM5 398 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 IGLC7A0M8Q6 106 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 DBX1A6NMT0 343 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 NPIPB5A8MRT5 1133 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 PRH1P02810 166 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 LGALS1P09382 135 aaKnown RBP7.53□□□□□ -1.2
LINC00339-210ENST00000635675 OR4E1P0C645 316 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 AREGP15514 252 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 PSMB6P28072 239 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 SUPT4H1P63272 117 aaKnown RBP7.53□□□□□ -1.2
LINC00339-210ENST00000635675 DHODHQ02127 395 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 PPP1R1AQ13522 171 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 FHL3Q13643 280 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 KLK9Q2XQG4 91 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 SLC25A42Q86VD7 318 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 SGPP2Q8IWX5 399 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 OR1L8Q8NGR8 309 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 LHFPL5Q8TAF8 219 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 GALNT14Q96FL9 552 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 OR5B12Q96R08 314 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 SRSF8Q9BRL6 282 aaKnown RBP7.53□□□□□ -1.2
LINC00339-210ENST00000635675 QTRT1Q9BXR0 403 aaKnown RBP7.53□□□□□ -1.2
LINC00339-210ENST00000635675 ALX4Q9H161 411 aaPredicted RBP7.53□□□□□ -1.2
LINC00339-210ENST00000635675 MED28Q9H204 178 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 GPN1Q9HCN4 374 aaPredicted RBP7.53□□□□□ -1.2
LINC00339-210ENST00000635675 NDUFA4L2Q9NRX3 87 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 TMEM14BQ9NUH8 114 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 FKBP11Q9NYL4 201 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 PRNDQ9UKY0 176 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 ZNF257Q9Y2Q1 563 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 KCNIP3Q9Y2W7 256 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 OR51B2Q9Y5P1 312 aa7.53□□□□□ -1.2
LINC00339-210ENST00000635675 C15orf61A6NNL5 157 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 ATG12O94817 140 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 IGHV3-11P01762 117 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 HLA-AP01891 365 aaKnown RBP7.52□□□□□ -1.2
LINC00339-210ENST00000635675 TRAPPC2P0DI81 140 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 TRAPPC2BP0DI82 140 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 CTRB1P17538 263 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 CD33P20138 364 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 CD300CQ08708 224 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 FCN2Q15485 313 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 IZUMO4Q1ZYL8 232 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 CTRB2Q6GPI1 263 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 THOC7Q6I9Y2 204 aaKnown RBP7.52□□□□□ -1.2
LINC00339-210ENST00000635675 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 SELENOHQ8IZQ5 122 aaKnown RBP7.52□□□□□ -1.2
LINC00339-210ENST00000635675 OR10W1Q8NGF6 305 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 OR5B3Q8NH48 314 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 OR4A16Q8NH70 328 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 USMG5Q96IX5 58 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 TMEM56Q96MV1 263 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 FANCD2OSQ96PS1 177 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 MGAT4CQ9UBM8 478 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 TMEM56-RWDD3S4R434 201 aa7.52□□□□□ -1.2
LINC00339-210ENST00000635675 C13orf42A0A1B0GVH6 325 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 FAM223BA6NKX1 122 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 CCSO14618 274 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 GOSR2O14653 212 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 PRAF2O60831 178 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 IL5P05113 134 aa7.52□□□□□ -1.21
LINC00339-210ENST00000635675 REG1AP05451 166 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms