RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 WDR86Q86TI4 376 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF573Q86YE8 665 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 H1FOOQ8IZA3 346 aaPredicted RBP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 GCSAMQ8N6F7 178 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 KLHDC1Q8N7A1 406 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 OR5D13Q8NGL4 314 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 OR2T6Q8NHC8 308 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SPIN2AQ99865 258 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SPIN2BQ9BPZ2 258 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SH3BGRL3Q9H299 93 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 TUBG2Q9NRH3 451 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 LYRM2Q9NU23 88 aaPredicted RBP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 RPUSD1Q9UJJ7 312 aaKnown RBP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 STRAPQ9Y3F4 350 aaKnown RBP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 TANC2Q9HCD6 1990 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 ANKRD30BLA7E2S9 258 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 J3QT63 122 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 CDIPTO14735 213 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 NDUFB3O43676 98 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 PRKACAP17612 351 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 ERVK11-1P61568 191 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 FAM76BQ5HYJ3 339 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 C9orf152Q5JTZ5 239 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM86BQ8N661 226 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 SECTM1Q8WVN6 248 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF488Q96MN9 340 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 SSX3Q99909 188 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 KPTNQ9Y664 436 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.88□□□□□ -1.79
LINC00550-201ENST00000629293 DEGS1O15121 323 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 NPFFO15130 113 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 PGLYRP1O75594 196 aaPredicted RBP3.88□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM50AO95807 157 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 SLC25A6P12236 298 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 VDAC1P21796 283 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 COX7A1P24310 79 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 NKX2-1P43699 371 aaPredicted RBP3.88□□□□□ -1.79
LINC00550-201ENST00000629293 HMGN3Q15651 99 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 FBLN7Q53RD9 439 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 FAM58AQ8N1B3 248 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF565Q8N9K5 539 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 OR4C13Q8NGP0 309 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 OR10Z1Q8NGY1 313 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 SIRPDQ9H106 197 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 HIPK2Q9H2X6 1198 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 CCL28Q9NRJ3 127 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 C19orf12Q9NSK7 152 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 FAM24AA6NFZ4 105 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 HSPB6O14558 160 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 AGPAT2O15120 278 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 RHBDL1O75783 438 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 IGLV2-14P01704 120 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 FOLR2P14207 255 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 PVALBP20472 110 aaPredicted RBP3.88□□□□□ -1.79
LINC00550-201ENST00000629293 NFYBP25208 207 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 CD200P41217 278 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 FHITP49789 147 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 RAB13P51153 203 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 LINC00310P59036 64 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 POLR2GP62487 172 aaKnown RBP eCLIP3.88□□□□□ -1.79
LINC00550-201ENST00000629293 CFHR3Q02985 330 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 BAXQ07812 192 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 GNMTQ14749 295 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 LRRC10Q5BKY1 277 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 MOB1BQ7L9L4 216 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF695Q8IW36 515 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM252Q8N6L7 170 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 ZNRD1Q9P1U0 126 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 PRELID1Q9Y255 219 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 OR2W1Q9Y3N9 320 aa3.88□□□□□ -1.79
LINC00550-201ENST00000629293 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 A0A0G2JRQ6 117 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 COLCA2A8K830 154 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 SSSCA1O60232 199 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 FCN3O75636 299 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 OPN1MWP04001 364 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 OPN1MW2P0DN77 364 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 OPN1MW3P0DN78 364 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 F2RP25116 425 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 PAX9P55771 341 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF266Q14584 549 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 GUK1Q16774 197 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF497Q6ZNH5 498 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM219Q86XT9 240 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 LFNGQ8NES3 379 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 SORL1Q92673 2214 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 A4D1N5 150 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 H7C2Y5 167 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 SLC33A1O00400 549 aaPredicted RBP3.87□□□□□ -1.79
LINC00550-201ENST00000629293 HSD17B6O14756 317 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 ACAA1P09110 424 aaPredicted RBP3.87□□□□□ -1.79
LINC00550-201ENST00000629293 PGA5P0DJD9 388 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 ATP6V0CP27449 155 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 PPP1CCP36873 323 aaKnown RBP3.87□□□□□ -1.79
LINC00550-201ENST00000629293 CAMLGP49069 296 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 PEA15Q15121 130 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 SPIN3Q5JUX0 258 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 SPSB3Q6PJ21 355 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 Q8IYB0 196 aa3.87□□□□□ -1.79
LINC00550-201ENST00000629293 CMTM1Q8IZ96 169 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms