RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 SPSB4Q96A44 273 aa8.66□□□□□ -1.02
TNFAIP3-208ENST00000615468 ZNF355PQ9NSJ1 428 aa8.66□□□□□ -1.02
TNFAIP3-208ENST00000615468 hCG_38984A0A1B0GV85 526 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 FOXH1O75593 365 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 IGLV3-19P01714 112 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 OR10J4P0C629 311 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 STAG3L2P0CL84 134 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 STAG3L3P0CL85 134 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 CATR1Q13166 79 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 OR2K2Q8NGT1 345 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 TNFRSF19Q9NS68 423 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 CSN3P07498 182 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 OR10W1Q8NGF6 305 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 SLC25A40Q8TBP6 338 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 SIGMAR1Q99720 223 aa8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 SF3B5Q9BWJ5 86 aaKnown RBP8.65□□□□□ -1.02
TNFAIP3-208ENST00000615468 ISLRO14498 428 aa8.65□□□□□ -1.03
TNFAIP3-208ENST00000615468 SYNGR3O43761 229 aa8.65□□□□□ -1.03
TNFAIP3-208ENST00000615468 LGALS7P47929 136 aa8.65□□□□□ -1.03
TNFAIP3-208ENST00000615468 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.03
TNFAIP3-208ENST00000615468 PILRBQ9UKJ0 227 aa8.65□□□□□ -1.03
TNFAIP3-208ENST00000615468 WDR83OSQ9Y284 106 aa8.65□□□□□ -1.03
TNFAIP3-208ENST00000615468 R4GN57 208 aa8.65□□□□□ -1.03
TNFAIP3-208ENST00000615468 K7ESF4 209 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 ZIC3O60481 467 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 CRYGSP22914 178 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 HIST1H1AQ02539 215 aaPredicted RBP8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 CEACAM16Q2WEN9 425 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 PERPQ96FX8 193 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 PLPPR2Q96GM1 343 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 TBR1Q16650 682 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 LTC4SQ16873 150 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 C10orf128Q5T292 105 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 SPATA12Q7Z6I5 190 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 OR4A5Q8NH83 315 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 CT55Q8WUE5 264 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 NPVFQ9HCQ7 196 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 SPCS1Q9Y6A9 102 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 RAB31Q13636 194 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 IGFBP7Q16270 282 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 Q6ZS49 121 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 AAED1Q7RTV5 226 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 ZNF441Q8N8Z8 693 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 WFDC12Q8WWY7 111 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 CHODLQ9H9P2 273 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 OCIAD1Q9NX40 245 aa8.64□□□□□ -1.03
TNFAIP3-208ENST00000615468 PRRC2CQ9Y520 2896 aaKnown RBP8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 C5orf49A4QMS7 147 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 A6NDN8 102 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 C22orf46C9J442 243 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 LINC00205P59089 165 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 TMEM42Q69YG0 159 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 MAP1LC3CQ9BXW4 147 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 MS4A5Q9H3V2 200 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 DLL3Q9NYJ7 618 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 KCNIP1Q9NZI2 227 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 JKAMPQ9P055 326 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 TRGV10A0A0A0MS01 117 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 PPIAL4CA0A0B4J2A2 164 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 A0A1B0GX78 115 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A10PA6NDY2 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A18PA6NE21 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A16PA6NEW6 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A20PA6NIJ5 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A8PA6NJQ4 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 C2orf70A6NJV1 201 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A7PA6NKC0 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 C17orf98A8MV24 154 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A22PA8MWA6 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A12PA8MX19 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A5PA8MXJ8 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A23PA8MXZ1 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 SYS1-DBNDD2H3BUS1 97 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 ZNF207O43670 478 aaKnown RBP8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A15PP0C7V4 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A13PP0C7W8 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A14PP0C7W9 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 FAM90A24PP0C7X0 464 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 PPIAL4GP0DN37 164 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 CD24P25063 80 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 ZNF788Q6ZQV5 615 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 BHLHA15Q7RTS1 189 aaPredicted RBP8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 COMMD5Q9GZQ3 224 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 A0A096LPE4 126 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 A0A1W2PQM1 296 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 IZUMO1RA6ND01 250 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 TNFSF15O95150 251 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 PRAMEF5Q5TYX0 476 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 PRAMEF6Q5VXH4 476 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 TMEM116Q8NCL8 245 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 OR4A16Q8NH70 328 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 RAB1CQ92928 201 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 OSTCQ9NRP0 149 aa8.63□□□□□ -1.03
TNFAIP3-208ENST00000615468 SVILO95425 2214 aa8.62□□□□□ -1.03
TNFAIP3-208ENST00000615468 C9JCJ5 164 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms