RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 OR5AC1P0C628 307 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 KLF9Q13886 244 aaPredicted RBP9.88□□□□□ -0.83
USE1-209ENST00000601592 SURF2Q15527 256 aaPredicted RBP9.88□□□□□ -0.83
USE1-209ENST00000601592 C15orf32Q32M92 178 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 C9orf66Q5T8R8 295 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 TRIQKQ629K1 86 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 NECAP1Q8NC96 275 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 DLX4Q92988 240 aaPredicted RBP9.88□□□□□ -0.83
USE1-209ENST00000601592 SEC22AQ96IW7 307 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 SCGB3A2Q96PL1 93 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 RTBDNQ9BSG5 229 aaPredicted RBP9.88□□□□□ -0.83
USE1-209ENST00000601592 C5orf66Q9H5L9 145 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 NAA60Q9H7X0 242 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 RANGRFQ9HD47 186 aaPredicted RBP9.88□□□□□ -0.83
USE1-209ENST00000601592 SLC2A8Q9NY64 477 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 FBXL7Q9UJT9 491 aa9.88□□□□□ -0.83
USE1-209ENST00000601592 IGLC7A0M8Q6 106 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 C15orf61A6NNL5 157 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 ATG12O94817 140 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 TRBV12-3P01733 135 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 FGF2P09038 288 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 OR13C7P0DN81 318 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 CTRB1P17538 263 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 ZP3P21754 424 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 ETV6P41212 452 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 IZUMO4Q1ZYL8 232 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 CTRB2Q6GPI1 263 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 THOC7Q6I9Y2 204 aaKnown RBP9.87□□□□□ -0.83
USE1-209ENST00000601592 SRRQ9GZT4 340 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 FKBP11Q9NYL4 201 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 PEF1Q9UBV8 284 aaKnown RBP9.87□□□□□ -0.83
USE1-209ENST00000601592 GPR132Q9UNW8 380 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 S4R3C0 116 aa9.87□□□□□ -0.83
USE1-209ENST00000601592 TRBV9A0A0B4J1U6 114 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 LINC00854A0A1B0GVQ3 168 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 DBX1A6NMT0 343 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 WIPF1O43516 503 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 IGKV1-5P01602 117 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 IGHV3-23P01764 117 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 CRYGCP07315 174 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 HIST1H1BP16401 226 aaKnown RBP9.86□□□□□ -0.83
USE1-209ENST00000601592 AKR1C4P17516 323 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 UCP1P25874 307 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 PDLIM3Q53GG5 364 aaPredicted RBP9.86□□□□□ -0.83
USE1-209ENST00000601592 ZNF343Q6P1L6 599 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 SGPP2Q8IWX5 399 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 GDPD1Q8N9F7 314 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 LSM10Q969L4 123 aaKnown RBP9.86□□□□□ -0.83
USE1-209ENST00000601592 RRNAD1Q96FB5 475 aaKnown RBP9.86□□□□□ -0.83
USE1-209ENST00000601592 TMEM56Q96MV1 263 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 SRSF8Q9BRL6 282 aaKnown RBP9.86□□□□□ -0.83
USE1-209ENST00000601592 TMEM14BQ9NUH8 114 aa9.86□□□□□ -0.83
USE1-209ENST00000601592 AURKAIP1Q9NWT8 199 aaPredicted RBP9.86□□□□□ -0.83
USE1-209ENST00000601592 CRYM-AS1A6NIL9 109 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 CYB5BO43169 146 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 SAP30O75446 220 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 B3GALNT1O75752 331 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 NDUFB8O95169 186 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 KRTAP10-11P60412 298 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 RPEL1Q2QD12 228 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 SPINK9Q5DT21 86 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 REC114Q7Z4M0 266 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 HSD17B13Q7Z5P4 300 aaPredicted RBP9.85□□□□□ -0.83
USE1-209ENST00000601592 TMED4Q7Z7H5 227 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 CADM3Q8N126 398 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 MRAPQ8TCY5 172 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 FANCD2OSQ96PS1 177 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 PDCD10Q9BUL8 212 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 TMEM222Q9H0R3 208 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 NDUFA4L2Q9NRX3 87 aa9.85□□□□□ -0.83
USE1-209ENST00000601592 IGLV11-55A0A075B6I3 123 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 PPP5D1E7EU14 171 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 IFNA17P01571 189 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 SYNJ2BPP57105 145 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 DHODHQ02127 395 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 BAK1Q16611 211 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 TMEM268Q5VZI3 342 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 SLC35G3Q8N808 338 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 GLYATL2Q8WU03 294 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 RBPMSQ93062 196 aaKnown RBP9.84□□□□□ -0.83
USE1-209ENST00000601592 TMEM230Q96A57 120 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 EEF1AKMT3Q96AZ1 226 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 PLEKHA3Q9HB20 300 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 PRR13Q9NZ81 148 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 KCNIP3Q9Y2W7 256 aa9.84□□□□□ -0.83
USE1-209ENST00000601592 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.83□□□□□ -0.84
USE1-209ENST00000601592 MFSD2BA6NFX1 497 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 BMPR1BO00238 502 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 LY86O95711 162 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 EGFEM1PQ0D2K5 195 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 CLEC19AQ6UXS0 136 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 LHFPL5Q8TAF8 219 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 CXorf58Q96LI9 332 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 OR4C12Q96R67 309 aa9.83□□□□□ -0.84
USE1-209ENST00000601592 ELOVL1Q9BW60 279 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms