RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 A0A0G2JRQ6 117 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 ANKRD34BA5PLL1 514 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 C15orf61A6NNL5 157 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 OR2J3O76001 311 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 P0C879 139 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 TRAPPC2P0DI81 140 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 TRAPPC2BP0DI82 140 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 IL7P13232 177 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 AKR1C4P17516 323 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 INPP1P49441 399 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 SLURP1P55000 103 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 BEAN1Q3B7T3 259 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 SLC25A42Q86VD7 318 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 OR1L8Q8NGR8 309 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 DPF1Q92782 380 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 SCGB3A2Q96PL1 93 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 FANCD2OSQ96PS1 177 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 PRNDQ9UKY0 176 aa15.48■□□□□ 0.07
SSBP4-210ENST00000601444 CDS2O95674 445 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 TRBV12-3P01733 135 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 HSPB1P04792 205 aaKnown RBP15.47■□□□□ 0.07
SSBP4-210ENST00000601444 CCR6P51684 374 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 AKR1C2P52895 323 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 SUPT4H1P63272 117 aaKnown RBP15.47■□□□□ 0.07
SSBP4-210ENST00000601444 DEFA6Q01524 100 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 WT1-ASQ06250 92 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 SGPP2Q8IWX5 399 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 OR4A16Q8NH70 328 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 DEDD2Q8WXF8 326 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 RCC1LQ96I51 464 aaKnown RBP15.47■□□□□ 0.07
SSBP4-210ENST00000601444 USMG5Q96IX5 58 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 TSC22D3Q99576 134 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 DMRT1Q9Y5R6 373 aa15.47■□□□□ 0.07
SSBP4-210ENST00000601444 A0A0B4J293 547 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 LINC01619G3V211 115 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 B3GALNT1O75752 331 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 NDUFB8O95169 186 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 OR13C7P0DN81 318 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 ZNF343Q6P1L6 599 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 TMED4Q7Z7H5 227 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 SELENOHQ8IZQ5 122 aaKnown RBP15.46■□□□□ 0.07
SSBP4-210ENST00000601444 DCUN1D4Q92564 292 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 DLX4Q92988 240 aaPredicted RBP15.46■□□□□ 0.07
SSBP4-210ENST00000601444 S4R3C0 116 aa15.46■□□□□ 0.07
SSBP4-210ENST00000601444 FAM223BA6NKX1 122 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 OR8U8P0C7N1 319 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 DEFA4P12838 97 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 DHODHQ02127 395 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 ATP5G2Q06055 141 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 TMEM187Q14656 261 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 Q6ZRM9 215 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 FAM223AQ8IWN6 122 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 NECAP1Q8NC96 275 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 OR5B3Q8NH48 314 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 SRSF8Q9BRL6 282 aaKnown RBP15.45■□□□□ 0.06
SSBP4-210ENST00000601444 FKBP11Q9NYL4 201 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 FBXL7Q9UJT9 491 aa15.45■□□□□ 0.06
SSBP4-210ENST00000601444 PRB2P02812 416 aaPredicted RBP15.44■□□□□ 0.06
SSBP4-210ENST00000601444 C15orf32Q32M92 178 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 SPINK9Q5DT21 86 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 KPRPQ5T749 579 aaPredicted RBP15.44■□□□□ 0.06
SSBP4-210ENST00000601444 TMEM268Q5VZI3 342 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 RBPMSQ93062 196 aaKnown RBP15.44■□□□□ 0.06
SSBP4-210ENST00000601444 GALNT14Q96FL9 552 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 TMEM56Q96MV1 263 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 SLC25A21Q9BQT8 299 aaPredicted RBP15.44■□□□□ 0.06
SSBP4-210ENST00000601444 BATF3Q9NR55 127 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 KCNIP3Q9Y2W7 256 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 TMEM56-RWDD3S4R434 201 aa15.44■□□□□ 0.06
SSBP4-210ENST00000601444 IGLV11-55A0A075B6I3 123 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 PLA2G10O15496 165 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 ATG12O94817 140 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 IGHV3-23P01764 117 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 HOXD3P31249 432 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 BTCP35070 178 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 HSPE1P61604 102 aaKnown RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 EXOSC2Q13868 293 aaKnown RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 KLK9Q2XQG4 91 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 RNASE11Q8TAA1 199 aaKnown RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 LSM10Q969L4 123 aaKnown RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 RRNAD1Q96FB5 475 aaKnown RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 RANGRFQ9HD47 186 aaPredicted RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 PTTG2Q9NZH5 202 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 PEF1Q9UBV8 284 aaKnown RBP15.43■□□□□ 0.06
SSBP4-210ENST00000601444 KLK9Q9UKQ9 250 aa15.43■□□□□ 0.06
SSBP4-210ENST00000601444 NAP1L6A6NFF2 107 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 ST8SIA3O43173 380 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 DUS4LO95620 317 aaKnown RBP15.42■□□□□ 0.06
SSBP4-210ENST00000601444 DHFRP00374 187 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 MECP2P51608 486 aaKnown RBP15.42■□□□□ 0.06
SSBP4-210ENST00000601444 MFAP2P55001 183 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 THOC7Q6I9Y2 204 aaKnown RBP15.42■□□□□ 0.06
SSBP4-210ENST00000601444 LINC00299Q6ZSB3 139 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 ZNF429Q86V71 674 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 GPR146Q96CH1 333 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 FLVCR2Q9UPI3 526 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 NOTCH1P46531 2555 aa15.42■□□□□ 0.06
SSBP4-210ENST00000601444 KRTAP10-11P60412 298 aa15.41■□□□□ 0.06
SSBP4-210ENST00000601444 PRCDQ00LT1 54 aa15.41■□□□□ 0.06
SSBP4-210ENST00000601444 RBMS2Q15434 407 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms