RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 S100GP29377 79 aa12.07□□□□□ -0.48
RPS28-203ENST00000600659 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
RPS28-203ENST00000600659 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
RPS28-203ENST00000600659 SURF2Q15527 256 aaPredicted RBP12.07□□□□□ -0.48
RPS28-203ENST00000600659 ACSM6Q6P461 480 aa12.07□□□□□ -0.48
RPS28-203ENST00000600659 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
RPS28-203ENST00000600659 OR6Q1Q8NGQ2 317 aa12.07□□□□□ -0.48
RPS28-203ENST00000600659 CCDC140Q96MF4 163 aa12.07□□□□□ -0.48
RPS28-203ENST00000600659 THAP7Q9BT49 309 aaPredicted RBP12.07□□□□□ -0.48
RPS28-203ENST00000600659 RANGRFQ9HD47 186 aaPredicted RBP12.07□□□□□ -0.48
RPS28-203ENST00000600659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
RPS28-203ENST00000600659 C3orf85A0A1B0GTC6 90 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 DISC1C4P0D8 188 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 BMPR1BO00238 502 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 UCP1P25874 307 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 MFAP2P55001 183 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 KLF5Q13887 457 aaPredicted RBP12.06□□□□□ -0.48
RPS28-203ENST00000600659 IZUMO4Q1ZYL8 232 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 C15orf32Q32M92 178 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 THOC7Q6I9Y2 204 aaKnown RBP12.06□□□□□ -0.48
RPS28-203ENST00000600659 LHFPL5Q8TAF8 219 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 ZFAND1Q8TCF1 268 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 TMEM230Q96A57 120 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 COMMD5Q9GZQ3 224 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 SRRQ9GZT4 340 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 PEF1Q9UBV8 284 aaKnown RBP12.06□□□□□ -0.48
RPS28-203ENST00000600659 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
RPS28-203ENST00000600659 A0A0G2JRQ6 117 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 S100A5P33763 92 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 ECI1P42126 302 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 SP6Q3SY56 376 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 IL34Q6ZMJ4 242 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 Q8N402 240 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 GDPD1Q8N9F7 314 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 OR1L8Q8NGR8 309 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 MRAPQ8TCY5 172 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 SDHCQ99643 169 aaPredicted RBP12.05□□□□□ -0.48
RPS28-203ENST00000600659 PRRT1Q99946 306 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 COPZ2Q9P299 210 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 FBXL7Q9UJT9 491 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 PRNDQ9UKY0 176 aa12.05□□□□□ -0.48
RPS28-203ENST00000600659 MFSD2BA6NFX1 497 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 TRAPPC2P0DI81 140 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 TRAPPC2BP0DI82 140 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 ZP3P21754 424 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 ATP5G2Q06055 141 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 PYDC2Q56P42 97 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 CCDC71LQ8N9Z2 235 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 OR5B3Q8NH48 314 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 GLYATL2Q8WU03 294 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 TSC22D3Q99576 134 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 NAA60Q9H7X0 242 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 NDUFA13Q9P0J0 144 aa12.04□□□□□ -0.48
RPS28-203ENST00000600659 CRYM-AS1A6NIL9 109 aa12.03□□□□□ -0.48
RPS28-203ENST00000600659 SERPINE2P07093 398 aa12.03□□□□□ -0.48
RPS28-203ENST00000600659 OR5AC1P0C628 307 aa12.03□□□□□ -0.48
RPS28-203ENST00000600659 INSL3P51460 131 aa12.03□□□□□ -0.48
RPS28-203ENST00000600659 H2BFWTQ7Z2G1 175 aa12.03□□□□□ -0.48
RPS28-203ENST00000600659 LSM10Q969L4 123 aaKnown RBP12.03□□□□□ -0.48
RPS28-203ENST00000600659 TMEM222Q9H0R3 208 aa12.03□□□□□ -0.48
RPS28-203ENST00000600659 S4R3C0 116 aa12.03□□□□□ -0.48
RPS28-203ENST00000600659 A0A0B4J293 547 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 PPP5D1E7EU14 171 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 SNAPC5O75971 98 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 CDS2O95674 445 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 IGHV3-23P01764 117 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 OR13C7P0DN81 318 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 SYNJ2BPP57105 145 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 SUPT4H1P63272 117 aaKnown RBP12.02□□□□□ -0.49
RPS28-203ENST00000600659 BAK1Q16611 211 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 ZNF429Q86V71 674 aa12.02□□□□□ -0.49
RPS28-203ENST00000600659 C14orf166Q9Y224 244 aaKnown RBP12.02□□□□□ -0.49
RPS28-203ENST00000600659 F11RQ9Y624 299 aaKnown RBP12.02□□□□□ -0.49
RPS28-203ENST00000600659 TEX13DA0A0J9YY54 714 aaPredicted RBP12.01□□□□□ -0.49
RPS28-203ENST00000600659 SAP30O75446 220 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 B3GALNT1O75752 331 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 HIST1H1BP16401 226 aaKnown RBP12.01□□□□□ -0.49
RPS28-203ENST00000600659 PRCDQ00LT1 54 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 Q6ZRM9 215 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 HSD17B13Q7Z5P4 300 aaPredicted RBP12.01□□□□□ -0.49
RPS28-203ENST00000600659 TOMM5Q8N4H5 51 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 OR9G4Q8NGQ1 327 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 ZNF502Q8TBZ5 544 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 GALNT14Q96FL9 552 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 PRR25Q96S07 402 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 MCUBQ9NWR8 336 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 SCP2D1Q9UJQ7 156 aa12.01□□□□□ -0.49
RPS28-203ENST00000600659 HUWE1Q7Z6Z7 4374 aaKnown RBP12.01□□□□□ -0.49
RPS28-203ENST00000600659 F8W735 103 aaPredicted RBP12□□□□□ -0.49
RPS28-203ENST00000600659 DHFRP00374 187 aa12□□□□□ -0.49
RPS28-203ENST00000600659 HLA-AP01891 365 aaKnown RBP12□□□□□ -0.49
RPS28-203ENST00000600659 TMEM187Q14656 261 aa12□□□□□ -0.49
RPS28-203ENST00000600659 RPEL1Q2QD12 228 aa12□□□□□ -0.49
RPS28-203ENST00000600659 AARDQ4LEZ3 155 aa12□□□□□ -0.49
RPS28-203ENST00000600659 SPANXN2Q5MJ10 180 aa12□□□□□ -0.49
RPS28-203ENST00000600659 ADAMTSL5Q6ZMM2 481 aa12□□□□□ -0.49
RPS28-203ENST00000600659 SELENOHQ8IZQ5 122 aaKnown RBP12□□□□□ -0.49
RPS28-203ENST00000600659 OR2C3Q8N628 320 aa12□□□□□ -0.49
RPS28-203ENST00000600659 OR4A16Q8NH70 328 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms