RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 ST6GALNAC6Q969X2 333 aa17.58■□□□□ 0.4
GRAMD1A-212ENST00000600231 FLYWCH2Q96CP2 140 aaKnown RBP17.58■□□□□ 0.4
GRAMD1A-212ENST00000600231 OR4F4Q96R69 305 aa17.58■□□□□ 0.4
GRAMD1A-212ENST00000600231 SMIM7Q9BQ49 75 aa17.58■□□□□ 0.4
GRAMD1A-212ENST00000600231 TEPPQ6URK8 271 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 LINC00311Q8N616 119 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 Q8WTZ3 238 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 RAB1CQ92928 201 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 RPUSD4Q96CM3 377 aaKnown RBP17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 NABP2Q9BQ15 211 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 SIRT7Q9NRC8 400 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 KLF2Q9Y5W3 355 aaPredicted RBP17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 TMEM250H0YL14 139 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 IGHV1-8P0DP01 117 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 TMEM177Q53S58 311 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 TMEM186Q96B77 213 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 MALSU1Q96EH3 234 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 FKBP11Q9NYL4 201 aa17.57■□□□□ 0.4
GRAMD1A-212ENST00000600231 AKR1D1P51857 326 aa17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 C8orf31Q8N9H6 132 aa17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 OR10W1Q8NGF6 305 aa17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 OR5B3Q8NH48 314 aa17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 SPTBN1Q01082 2364 aaKnown RBP17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 CXorf65A6NEN9 183 aa17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 SNRPEP62304 92 aaKnown RBP17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 OR9G1Q8NH87 305 aa17.56■□□□□ 0.4
GRAMD1A-212ENST00000600231 DCHS2Q6V1P9 2916 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 A0A087X0M5 115 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 A0A1B0GX30 115 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 CXCL1P09341 107 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 RPL35P42766 123 aaKnown RBP17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 B2MP61769 119 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 ZNF672Q499Z4 452 aaPredicted RBP17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 PLXNB1O43157 2135 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 MOB3BQ86TA1 216 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 OR4C13Q8NGP0 309 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 FAM122AQ96E09 287 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 PARLQ9H300 379 aa17.55■□□□□ 0.4
GRAMD1A-212ENST00000600231 DLX1P56177 255 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 ABHD5Q8WTS1 349 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 NAT8Q9UHE5 227 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 RALYQ9UKM9 306 aaKnown RBP17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 E7EUB6 86 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 IGFBP2P18065 325 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 RPL8P62917 257 aaKnown RBP17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 TMEM249Q2WGJ8 235 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 FAM71F2Q6NXP2 309 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 CYP2G1PQ6ZSU1 146 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 STPG3Q8N7X2 389 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 COMMD5Q9GZQ3 224 aa17.54■□□□□ 0.4
GRAMD1A-212ENST00000600231 C11orf94C9JXX5 98 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 RPS10P46783 165 aaKnown RBP17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 ZNF137PP52743 207 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 UBE2G2P60604 165 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 TMEM241Q24JQ0 296 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 PDPNQ86YL7 162 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 TGIF2-C20orf24A0A0A6YYL0 155 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 ARL14EPLP0DKL9 152 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 ZNF841Q6ZN19 808 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 TGIF2LXQ8IUE1 241 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 TMEM133Q9H2Q1 129 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 NDUFA4L2Q9NRX3 87 aa17.53■□□□□ 0.4
GRAMD1A-212ENST00000600231 TRBV23-1A0A0A0MS06 115 aa17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 PRB3Q04118 309 aaPredicted RBP17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 ADIRFQ15847 76 aa17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 BSXQ3C1V8 233 aa17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 LINC00518Q8N0U6 118 aa17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 NEIL1Q96FI4 390 aaPredicted RBP17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 TMEM242Q9NWH2 141 aa17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 NAV3Q8IVL0 2385 aa17.52■□□□□ 0.4
GRAMD1A-212ENST00000600231 S100A6P06703 90 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 STAG3L2P0CL84 134 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 STAG3L3P0CL85 134 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 RNASE2P10153 161 aaKnown RBP17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 NPPCP23582 126 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 RAB31Q13636 194 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 MLANAQ16655 118 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 C2orf83Q53S99 150 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 SSX3Q99909 188 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 SEPSECSQ9HD40 501 aaKnown RBP17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 KCNIP2Q9NS61 270 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 WASHC3Q9Y3C0 194 aa17.52■□□□□ 0.39
GRAMD1A-212ENST00000600231 TACC2O95359 2948 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 C5orf52A6NGY3 159 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 USF1P22415 310 aaPredicted RBP17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 RPL29P47914 159 aaKnown RBP17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 SPNS3Q6ZMD2 512 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 OR51G1Q8NGK1 321 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 FNDC10F2Z333 226 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 CLDN34H7C241 214 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 IGLV2-23P01705 113 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 ATP5G3P48201 142 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 CST9LP1Q5W188 147 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 C1QL4Q86Z23 238 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 OR1L8Q8NGR8 309 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 TMEM167AQ8TBQ9 72 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 RITA1Q96K30 269 aa17.51■□□□□ 0.39
GRAMD1A-212ENST00000600231 IGKV1OR2-108A0A075B7D4 117 aa17.5■□□□□ 0.39
GRAMD1A-212ENST00000600231 IGHV2-70P01814 119 aa17.5■□□□□ 0.39
GRAMD1A-212ENST00000600231 RPL23P62829 140 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms