RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ZNF257Q9Y2Q1 563 aa10.65□□□□□ -0.7
SHKBP1-207ENST00000595631 BRI3O95415 125 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 TRAPPC2P0DI81 140 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 TRAPPC2BP0DI82 140 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 CTRB1P17538 263 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 SUPT4H1P63272 117 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 WT1-ASQ06250 92 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 ZNF616Q08AN1 781 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 CTRB2Q6GPI1 263 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 SELENOHQ8IZQ5 122 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 CADM3Q8N126 398 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 OR1L8Q8NGR8 309 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 OR4A16Q8NH70 328 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 SCGB3A2Q96PL1 93 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 FANCD2OSQ96PS1 177 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 NDUFA4L2Q9NRX3 87 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 TMEM14BQ9NUH8 114 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 PTTG2Q9NZH5 202 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 DMRT1Q9Y5R6 373 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 S4R3C0 116 aa10.64□□□□□ -0.71
SHKBP1-207ENST00000595631 TRBV9A0A0B4J1U6 114 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 CDS2O95674 445 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 CRYGCP07315 174 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 FGF2P09038 288 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 OR13C7P0DN81 318 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 BTCP35070 178 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 TMEM187Q14656 261 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 BEAN1Q3B7T3 259 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 SPINK9Q5DT21 86 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 SLC25A42Q86VD7 318 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 SGPP2Q8IWX5 399 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 RNASE11Q8TAA1 199 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 DEDD2Q8WXF8 326 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 DPF1Q92782 380 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 NOTCH3Q9UM47 2321 aa10.63□□□□□ -0.71
SHKBP1-207ENST00000595631 A0A0B4J293 547 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 A0A0G2JLM5 398 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 LINC01619G3V211 115 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 PLA2G10O15496 165 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 B3GALNT1O75752 331 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 NDUFB8O95169 186 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 IGHV3-23P01764 117 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 HSPB1P04792 205 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 OR8U8P0C7N1 319 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 DHODHQ02127 395 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 TMEM268Q5VZI3 342 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 Q6ZRM9 215 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 DCUN1D4Q92564 292 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 TSC22D3Q99576 134 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 FBXL7Q9UJT9 491 aa10.62□□□□□ -0.71
SHKBP1-207ENST00000595631 IGLV11-55A0A075B6I3 123 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 ST8SIA3O43173 380 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 PRB2P02812 416 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 DEFA4P12838 97 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 MECP2P51608 486 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 MFAP2P55001 183 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 DEFA6Q01524 100 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 ATP5G2Q06055 141 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 C15orf32Q32M92 178 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 ZNF343Q6P1L6 599 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 SLC35G3Q8N808 338 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 OR5B3Q8NH48 314 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 DLX4Q92988 240 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 RBPMSQ93062 196 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 LSM10Q969L4 123 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 GPR146Q96CH1 333 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 RRNAD1Q96FB5 475 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 GALNT14Q96FL9 552 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 USMG5Q96IX5 58 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 SLC25A21Q9BQT8 299 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 SRSF8Q9BRL6 282 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 FKBP11Q9NYL4 201 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 FLVCR2Q9UPI3 526 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
SHKBP1-207ENST00000595631 NAP1L6A6NFF2 107 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 ATG12O94817 140 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 NDUFB6O95139 128 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 VAMP1P23763 118 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 HOXD3P31249 432 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 HSPE1P61604 102 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 PRCDQ00LT1 54 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 PPP1R1AQ13522 171 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 THOC7Q6I9Y2 204 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 LINC00299Q6ZSB3 139 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 S100ZQ8WXG8 99 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 PEF1Q9UBV8 284 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 KCNIP3Q9Y2W7 256 aa10.6□□□□□ -0.71
SHKBP1-207ENST00000595631 NOTCH1P46531 2555 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 MFSD2BA6NFX1 497 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 PPP5D1E7EU14 171 aa10.59□□□□□ -0.71
SHKBP1-207ENST00000595631 NXPH3O95157 252 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms