RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 NDUFA4L2Q9NRX3 87 aa19.98■□□□□ 0.79
TRIM28-204ENST00000594806 DUS4LO95620 317 aaKnown RBP19.97■□□□□ 0.79
TRIM28-204ENST00000594806 ANXA3P12429 323 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 MYOD1P15172 320 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 CTRB1P17538 263 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 FHL3Q13643 280 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 KLK9Q2XQG4 91 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 TMEM128Q5BJH2 165 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 CTRB2Q6GPI1 263 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 OR1N2Q8NGR9 330 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 RBPMSQ93062 196 aaKnown RBP19.97■□□□□ 0.79
TRIM28-204ENST00000594806 IL22RA2Q969J5 263 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 TMEM230Q96A57 120 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 TMEM56Q96MV1 263 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 KLK9Q9UKQ9 250 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 TMEM56-RWDD3S4R434 201 aa19.97■□□□□ 0.79
TRIM28-204ENST00000594806 NOTCH3Q9UM47 2321 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 OR8U8P0C7N1 319 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 P0C879 139 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 HIST1H1BP16401 226 aaKnown RBP19.96■□□□□ 0.79
TRIM28-204ENST00000594806 AKR1C4P17516 323 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 ZNF616Q08AN1 781 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 DEFB136Q30KP8 78 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 ZNF429Q86V71 674 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 NECAP1Q8NC96 275 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 DPF1Q92782 380 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 LSM10Q969L4 123 aaKnown RBP19.96■□□□□ 0.79
TRIM28-204ENST00000594806 RCC1LQ96I51 464 aaKnown RBP19.96■□□□□ 0.79
TRIM28-204ENST00000594806 NSG2Q9Y328 171 aa19.96■□□□□ 0.79
TRIM28-204ENST00000594806 IGLC7A0M8Q6 106 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 CYB5BO43169 146 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 IGKV1-5P01602 117 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 AREGP15514 252 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 SRPXP78539 464 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 FAM209BQ5JX69 171 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 OR5B12Q96R08 314 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 MCRIP2Q9BUT9 160 aaKnown RBP19.95■□□□□ 0.78
TRIM28-204ENST00000594806 FBN3Q75N90 2809 aa19.95■□□□□ 0.78
TRIM28-204ENST00000594806 RBMXL2O75526 392 aaKnown RBP19.94■□□□□ 0.78
TRIM28-204ENST00000594806 HSPB1P04792 205 aaKnown RBP19.94■□□□□ 0.78
TRIM28-204ENST00000594806 HSPE1P61604 102 aaKnown RBP19.94■□□□□ 0.78
TRIM28-204ENST00000594806 RHOGP84095 191 aa19.94■□□□□ 0.78
TRIM28-204ENST00000594806 TMEM187Q14656 261 aa19.94■□□□□ 0.78
TRIM28-204ENST00000594806 TMED4Q7Z7H5 227 aa19.94■□□□□ 0.78
TRIM28-204ENST00000594806 SELENOHQ8IZQ5 122 aaKnown RBP19.94■□□□□ 0.78
TRIM28-204ENST00000594806 RNASE11Q8TAA1 199 aaKnown RBP19.94■□□□□ 0.78
TRIM28-204ENST00000594806 WDR12Q9GZL7 423 aaKnown RBP19.94■□□□□ 0.78
TRIM28-204ENST00000594806 NDUFB6O95139 128 aa19.93■□□□□ 0.78
TRIM28-204ENST00000594806 IGHV3-11P01762 117 aa19.93■□□□□ 0.78
TRIM28-204ENST00000594806 DEFA4P12838 97 aa19.93■□□□□ 0.78
TRIM28-204ENST00000594806 UBE2MP61081 183 aaKnown RBP19.93■□□□□ 0.78
TRIM28-204ENST00000594806 ATP5G2Q06055 141 aa19.93■□□□□ 0.78
TRIM28-204ENST00000594806 DUX3Q96PT4 197 aa19.93■□□□□ 0.78
TRIM28-204ENST00000594806 GPR61Q9BZJ8 451 aa19.93■□□□□ 0.78
TRIM28-204ENST00000594806 RANGRFQ9HD47 186 aaPredicted RBP19.93■□□□□ 0.78
TRIM28-204ENST00000594806 LINC01619G3V211 115 aa19.92■□□□□ 0.78
TRIM28-204ENST00000594806 SUPT4H1P63272 117 aaKnown RBP19.92■□□□□ 0.78
TRIM28-204ENST00000594806 ZNF343Q6P1L6 599 aa19.92■□□□□ 0.78
TRIM28-204ENST00000594806 CENPSQ8N2Z9 138 aa19.92■□□□□ 0.78
TRIM28-204ENST00000594806 HINT2Q9BX68 163 aa19.92■□□□□ 0.78
TRIM28-204ENST00000594806 THYN1Q9P016 225 aa19.92■□□□□ 0.78
TRIM28-204ENST00000594806 CACFD1Q9UGQ2 172 aa19.92■□□□□ 0.78
TRIM28-204ENST00000594806 CMYA5Q8N3K9 4069 aa19.92■□□□□ 0.78
TRIM28-204ENST00000594806 NBEAL1Q6ZS30 2694 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 LINC00854A0A1B0GVQ3 168 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 PRH1P02810 166 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 OR13C7P0DN81 318 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 CCR6P51684 374 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 PRCDQ00LT1 54 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 ZNF846Q147U1 533 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 SAMD5Q5TGI4 173 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 TMEM268Q5VZI3 342 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 LGI3Q8N145 548 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 OR10W1Q8NGF6 305 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 OR1L6Q8NGR2 347 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 LHFPL5Q8TAF8 219 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 FANCD2OSQ96PS1 177 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 PDCD10Q9BUL8 212 aa19.91■□□□□ 0.78
TRIM28-204ENST00000594806 A0A0B4J293 547 aa19.9■□□□□ 0.78
TRIM28-204ENST00000594806 DBX1A6NMT0 343 aa19.9■□□□□ 0.78
TRIM28-204ENST00000594806 WT1-ASQ06250 92 aa19.9■□□□□ 0.78
TRIM28-204ENST00000594806 ALX4Q9H161 411 aaPredicted RBP19.9■□□□□ 0.78
TRIM28-204ENST00000594806 IGLV11-55A0A075B6I3 123 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 A0A0B4J2A0 478 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 DUXBA0A1W2PPF3 345 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 PLA2G10O15496 165 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 LYRM1O43325 122 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 OR2J3O76001 311 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 REG1AP05451 166 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 ZP3P21754 424 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 MECP2P51608 486 aaKnown RBP19.89■□□□□ 0.77
TRIM28-204ENST00000594806 RAB25P57735 213 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 C15orf32Q32M92 178 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.89■□□□□ 0.77
TRIM28-204ENST00000594806 PEF1Q9UBV8 284 aaKnown RBP19.89■□□□□ 0.77
TRIM28-204ENST00000594806 SHPKQ9UHJ6 478 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 FBXL7Q9UJT9 491 aa19.89■□□□□ 0.77
TRIM28-204ENST00000594806 IGHV4OR15-8A0A075B7B6 117 aa19.88■□□□□ 0.77
TRIM28-204ENST00000594806 A0A087WW49 117 aa19.88■□□□□ 0.77
TRIM28-204ENST00000594806 INS-IGF2F8WCM5 200 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms