RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SLC25A42Q86VD7 318 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 SPAG16Q8N0X2 631 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 OR4D10Q8NGI6 311 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 OR4S2Q8NH73 311 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 TUBA4BQ9H853 241 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 KLK9Q9UKQ9 250 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 RYR2Q92736 4967 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 DYNC2H1Q8NCM8 4307 aaKnown RBP7.87□□□□□ -1.15
VPS4B-207ENST00000591519 DPPA5A6NC42 116 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 RAB3DO95716 219 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 PI3P19957 117 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 S100A5P33763 92 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 KIR2DS2P43631 304 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 BRWD1-AS2P59051 145 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 TAS2R19P59542 299 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 CATR1Q13166 79 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 DEFB114Q30KQ6 69 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 SCGB2B2Q4G0G5 96 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 PYDC2Q56P42 97 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 ZFAND6Q6FIF0 208 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 ZBTB34Q8NCN2 500 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 C15orf40Q8WUR7 153 aa7.86□□□□□ -1.15
VPS4B-207ENST00000591519 NXF2Q9GZY0 626 aaKnown RBP7.86□□□□□ -1.15
VPS4B-207ENST00000591519 TEX22C9J3V5 150 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 LGALS9O00182 355 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 GPR31O00270 319 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 MPPED1O15442 326 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 PGLYRP1O75594 196 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-207ENST00000591519 S1PR2O95136 353 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 PRH1P02810 166 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 CRYGCP07315 174 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 MYOD1P15172 320 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 MAS1LP35410 378 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 EXOSC2Q13868 293 aaKnown RBP7.85□□□□□ -1.15
VPS4B-207ENST00000591519 C15orf32Q32M92 178 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 CD300EQ496F6 205 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-207ENST00000591519 C10orf55Q5SWW7 151 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 STEAP1BQ6NZ63 245 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 GPHB5Q86YW7 130 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 CMTM1Q8IZ96 169 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 PUSL1Q8N0Z8 303 aaKnown RBP7.85□□□□□ -1.15
VPS4B-207ENST00000591519 TMEM229BQ8NBD8 167 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 VSTM2AQ8TAG5 236 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 TMEM167AQ8TBQ9 72 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 SMIM4Q8WVI0 70 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 OR2A7Q96R45 310 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 HIPK2Q9H2X6 1198 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 HRASLSQ9HDD0 168 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 ZC4H2Q9NQZ6 224 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 SLC2A9Q9NRM0 540 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 GAR1Q9NY12 217 aaKnown RBP7.85□□□□□ -1.15
VPS4B-207ENST00000591519 TECRQ9NZ01 308 aaKnown RBP7.85□□□□□ -1.15
VPS4B-207ENST00000591519 ZNF257Q9Y2Q1 563 aa7.85□□□□□ -1.15
VPS4B-207ENST00000591519 C2orf70A6NJV1 201 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 NPIPB5A8MRT5 1133 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 E7EUB6 86 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 GGCTO75223 188 aaKnown RBP7.84□□□□□ -1.15
VPS4B-207ENST00000591519 TPPPO94811 219 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 IL6RP08887 468 aaPredicted RBP7.84□□□□□ -1.15
VPS4B-207ENST00000591519 ZNF735P0CB33 412 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 LPAR6P43657 344 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 MRPS10P82664 201 aaKnown RBP7.84□□□□□ -1.15
VPS4B-207ENST00000591519 MSMO1Q15800 293 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 TBC1D26Q86UD7 250 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 DMBX1Q8NFW5 382 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 IL17DQ8TAD2 202 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 BORCS5Q969J3 196 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 MISP3Q96FF7 219 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 FANCD2OSQ96PS1 177 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 FYTTD1Q96QD9 318 aaKnown RBP7.84□□□□□ -1.15
VPS4B-207ENST00000591519 NEURL2Q9BR09 285 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 SACSQ9NZJ4 4579 aa7.84□□□□□ -1.15
VPS4B-207ENST00000591519 TRAV3A0A0B4J244 114 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 A0A1B0GW64 132 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
VPS4B-207ENST00000591519 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
VPS4B-207ENST00000591519 HMX3A6NHT5 357 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 ZNF701M0R085 212 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-207ENST00000591519 CTDSPLO15194 276 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 OR2J3O76001 311 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 KBTBD11O94819 623 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 HRASP01112 189 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 CD74P04233 296 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 CD7P09564 240 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
VPS4B-207ENST00000591519 FOLR2P14207 255 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 CBLN1P23435 193 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 S100GP29377 79 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 CD81P60033 236 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 ID3Q02535 119 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 OR4A47Q6IF82 309 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 SLC38A6Q8IZM9 456 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 OR4C16Q8NGL9 310 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 MARCH1Q8TCQ1 289 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 DGCR14Q96DF8 476 aaKnown RBP7.83□□□□□ -1.16
VPS4B-207ENST00000591519 SOSTQ9BQB4 213 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 AIFM2Q9BRQ8 373 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 MCUBQ9NWR8 336 aa7.83□□□□□ -1.16
VPS4B-207ENST00000591519 SLC2A8Q9NY64 477 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms