RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZIC4Q8N9L1 334 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 OR10AD1Q8NGE0 317 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 OR10D4PQ8NGN7 298 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 C8orf46Q8TAG6 207 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 FAM213BQ8TBF2 198 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 MAFIPQ8WZ33 124 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 PIGCQ92535 297 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 FRZBQ92765 325 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 LSM10Q969L4 123 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF799Q96GE5 643 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 FAM210BQ96KR6 192 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 LURAP1Q96LR2 239 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 NOL4LQ96MY1 436 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 RBM14Q96PK6 669 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 TP53RKQ96S44 253 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 NIPSNAP3BQ9BS92 247 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 AGMATQ9BSE5 352 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 PSMG3Q9BT73 122 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 C20orf24Q9BUV8 137 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 STRADBQ9C0K7 418 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 PARP12Q9H0J9 701 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 KLRF1Q9NZS2 232 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 GNG12Q9UBI6 72 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 B4GALT7Q9UBV7 327 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 VAX2Q9UIW0 290 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 NXT1Q9UKK6 140 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 POLR1DQ9Y2S0 133 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 WSB1Q9Y6I7 421 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 VCANP13611 3396 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 THADAQ6YHU6 1953 aa3.03□□□□□ -1.92
SMCHD1-208ENST00000583344 IGLV4-3A0A075B6K6 122 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1-27A0A075B6S5 117 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TGIF2-C20orf24A0A0A6YYL0 155 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 IGHV1OR15-9A0A0B4J2B8 117 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1-12A0A0C4DH73 117 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 hCG_38984A0A1B0GV85 526 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 LRP5LA4QPB2 252 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 OR6C6A6NF89 314 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 F5H5K5 113 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TSTD3H0UI37 97 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 K7EQD1 137 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TP53I11O14683 189 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 CYB5BO43169 146 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 XRCC2O43543 280 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 DUX1O43812 170 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 CHST1O43916 411 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TIMM8AO60220 97 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 PGLYRP1O75594 196 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM50AO95807 157 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 NAPSAO96009 420 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 NRASP01111 189 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 PPYP01298 95 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 IFNA5P01569 189 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1D-12P01611 117 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TCN2P20062 427 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 DDTP30046 118 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 IL2RGP31785 369 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 OPRM1P35372 400 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 DYNLT3P51808 116 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 DSCR4P56555 118 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 CCL7P80098 99 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF92Q03936 586 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 PRDX4Q13162 271 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 RAB35Q15286 201 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM249Q2WGJ8 235 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 AKR1C8PQ5T2L2 129 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 OR2T2Q6IF00 324 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF880Q6PDB4 577 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 C16orf47Q6ZP98 133 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 LANCL3Q6ZV70 420 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 Q6ZVQ6 151 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 SSX9Q7RTT3 188 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 STX12Q86Y82 276 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF695Q8IW36 515 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM183AQ8IXX5 376 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 CMTM1Q8IZ96 169 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 GPR137CQ8N3F9 429 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 CYB561D1Q8N8Q1 229 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ZFP62Q8NB50 900 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 HSD17B11Q8NBQ5 300 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 OR5D18Q8NGL1 313 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 OR5C1Q8NGR4 320 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 OR1F12Q8NHA8 337 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 OR2V1Q8NHB1 315 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 CA5BP1Q8WTZ4 195 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 BORCS8Q96FH0 119 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ACY3Q96HD9 319 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 REEP6Q96HR9 211 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 IMMP2LQ96T52 175 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ATP5SQ99766 215 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 HDHD3Q9BSH5 251 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ELL3Q9HB65 397 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 SLC7A11Q9UPY5 501 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ST3GAL6Q9Y274 331 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 TP53TG5Q9Y2B4 290 aa3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 MRPS18CQ9Y3D5 142 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-208ENST00000583344 ATG2AQ2TAZ0 1938 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 MPDZO75970 2070 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 DOCK8Q8NF50 2099 aa3.01□□□□□ -1.93
SMCHD1-208ENST00000583344 IGHV3-20A0A0C4DH32 117 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms