RNA–Protein interactions for RNA: ENST00000580027.1

LLGL2-215, Transcript of LLGL2, scribble cell polarity complex component, human

TSL 2

Gene LLGL2, Length 1,875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LLGL2-215	ENST00000580027	TEX50	A0A1B0GTY4	177 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	CXorf65	A6NEN9	183 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	ZNF727	A8MUV8	499 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	SIAH2	O43255	324 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	YIF1A	O95070	293 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	ADORA2A-AS1	P86434	159 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	TMEM249	Q2WGJ8	235 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	TMEM177	Q53S58	311 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	SDF2L1	Q9HCN8	221 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	TRBV23-1	A0A0A0MS06	115 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	hCG_1809904	A0A1W2PP81	198 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027		A0A1W2PR64	198 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027		A0A1W2PRV1	198 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	FNDC10	F2Z333	226 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	TMEM250	H0YL14	139 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	AGA	P20933	346 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	ATP5I	P56385	69 aa	Predicted RBP	13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	ZNF672	Q499Z4	452 aa	Predicted RBP	13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	GCSAML	Q5JQS6	135 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	WDR25	Q64LD2	544 aa	Predicted RBP	13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	OR5B3	Q8NH48	314 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	OR9G1	Q8NH87	305 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	C2CD4C	Q8TF44	421 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	C1orf159	Q96HA4	380 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	HARBI1	Q96MB7	349 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	NABP2	Q9BQ15	211 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027	PXMP4	Q9Y6I8	212 aa		13.36	□□□□□ -0.27
LLGL2-215	ENST00000580027		A0A1W2PPV4	95 aa		13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	FSTL3	O95633	263 aa		13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	ZNF137P	P52743	207 aa		13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	TEPP	Q6URK8	271 aa		13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	PDPN	Q86YL7	162 aa		13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	ST6GALNAC6	Q969X2	333 aa		13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	FLYWCH2	Q96CP2	140 aa	Known RBP	13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	NEIL1	Q96FI4	390 aa	Predicted RBP	13.35	□□□□□ -0.27
LLGL2-215	ENST00000580027	IGHV1-8	P0DP01	117 aa		13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	DEFA4	P12838	97 aa		13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	COL8A2	P25067	703 aa		13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	REG1B	P48304	166 aa		13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	S100A12	P80511	92 aa		13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	MIC13	Q5XKP0	118 aa		13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	GATAD1	Q8WUU5	269 aa		13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	USP9X	Q93008	2570 aa	Predicted RBP	13.34	□□□□□ -0.27
LLGL2-215	ENST00000580027	PAGE4	O60829	102 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	OPN1MW	P04001	364 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	OPN1MW2	P0DN77	364 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	OPN1MW3	P0DN78	364 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	RAB31	Q13636	194 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	OR4C13	Q8NGP0	309 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	OR4A5	Q8NH83	315 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	PCGF1	Q9BSM1	259 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	PATZ1	Q9HBE1	687 aa	Known RBP	13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	NAT8	Q9UHE5	227 aa		13.33	□□□□□ -0.27
LLGL2-215	ENST00000580027	UBR5	O95071	2799 aa	Predicted RBP	13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	ARFGEF3	Q5TH69	2177 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	LYNX1	G3V0Z9	82 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	LYNX1	P0DP58	116 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	PPOX	P50336	477 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	DIAPH2-AS1	Q14236	149 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	CDSN	Q15517	529 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	C2orf83	Q53S99	150 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	C11orf42	Q8N5U0	333 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	OR4F5	Q8NH21	305 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	OR4F4	Q96R69	305 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	SMIM7	Q9BQ49	75 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	TMEM204	Q9BSN7	226 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	TMEM133	Q9H2Q1	129 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	TMEM242	Q9NWH2	141 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	WASHC3	Q9Y3C0	194 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	ROS1	P08922	2347 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	LRRK2	Q5S007	2527 aa		13.33	□□□□□ -0.28
LLGL2-215	ENST00000580027	USF1	P22415	310 aa	Predicted RBP	13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	IL3RA	P26951	378 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	RPL29	P47914	159 aa	Known RBP	13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	ELOB	Q15370	118 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	BSX	Q3C1V8	233 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	CYP2G1P	Q6ZSU1	146 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	TGIF2LX	Q8IUE1	241 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	OR1L8	Q8NGR8	309 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	VSTM2A	Q8TAG5	236 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	TMEM167A	Q8TBQ9	72 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	SPTBN1	Q01082	2364 aa	Known RBP	13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	TENM4	Q6N022	2769 aa		13.32	□□□□□ -0.28
LLGL2-215	ENST00000580027	IGHV2-70	P01814	119 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	B2M	P61769	119 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	RPL8	P62917	257 aa	Known RBP	13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	TMEM241	Q24JQ0	296 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	C1QL4	Q86Z23	238 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	SSMEM1	Q8WWF3	244 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	COMMD5	Q9GZQ3	224 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	NDUFA4L2	Q9NRX3	87 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	GCN1	Q92616	2671 aa	Known RBP	13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	ADGRG4	Q8IZF6	3080 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	INS-IGF2	F8WCM5	200 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	STAG3L2	P0CL84	134 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	STAG3L3	P0CL85	134 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	RNASE2	P10153	161 aa	Known RBP	13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	MC5R	P33032	325 aa		13.31	□□□□□ -0.28
LLGL2-215	ENST00000580027	ZNF674	Q2M3X9	581 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms