RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TMEM186Q96B77 213 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SLC35E1Q96K37 410 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HARBI1Q96MB7 349 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BNQ99877 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST1H2BMQ99879 126 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NABP2Q9BQ15 211 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SCNM1Q9BWG6 230 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CTSZQ9UBR2 303 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SLC45A2Q9UMX9 530 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HCFC1P51610 2035 aa7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TET2Q6N021 2002 aaPredicted RBP7.61□□□□□ -1.19
CDK5RAP3-208ENST00000578525 A0A1W2PN81 502 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 B9A039 149 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DLL1O00548 723 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DVL1O14640 695 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PHOX2AO14813 284 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PPP1R2P9O14990 202 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 IGKV1-16P04430 117 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CD3EP07766 207 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 LINC00869P0C866 280 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TRGC1P0CF51 173 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CD99P14209 185 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 USF1P22415 310 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 IL3RAP26951 378 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 APOBEC3AP31941 199 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CHRNA7P36544 502 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMEM155Q4W5P6 130 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SPATA31B1PQ5VZV4 182 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NECAP1Q8NC96 275 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR51G1Q8NGK1 321 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR10X1Q8NGY0 326 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 VSTM2AQ8TAG5 236 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMEM167AQ8TBQ9 72 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 FLYWCH2Q96CP2 140 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PCGF1Q9BSM1 259 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMEM204Q9BSN7 226 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CHODLQ9H9P2 273 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ARL2-SNX15V9GYD0 113 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 FAM186AA6NE01 2351 aa7.6□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CACNA1HO95180 2353 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 A0A087X0M5 115 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TRBV23-1A0A0A0MS06 115 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 IGHV1-69-2A0A0G2JMI3 117 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 A0A1B0GX30 115 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 GGCTO75223 188 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NDUFB4O95168 129 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 AREGP15514 252 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 S100A2P29034 98 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR10J1P30954 320 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ZNF137PP52743 207 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CASP6P55212 293 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RPL8P62917 257 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ERHP84090 104 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 CD69Q07108 199 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 KCNIP4Q6PIL6 250 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 LINC01551Q86U37 167 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HIST3H2BBQ8N257 126 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 OR9G1Q8NH87 305 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 C11orf52Q96A22 123 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 UHRF2Q96PU4 802 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ELOVL1Q9BW60 279 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 COMMD5Q9GZQ3 224 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NDUFA4L2Q9NRX3 87 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 FUT9Q9Y231 359 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 WASHC3Q9Y3C0 194 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 YTHDF2Q9Y5A9 579 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 USF3Q68DE3 2245 aa7.59□□□□□ -1.19
CDK5RAP3-208ENST00000578525 MYO15AQ9UKN7 3530 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MDFIC2A0A1B0GVS7 189 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 SCO2A0A1W2PP80 73 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IFITM10A6NMD0 228 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PPP5D1E7EU14 171 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TYMSP04818 313 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CHRNB4P30926 498 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 GPX4P36969 197 aaPredicted RBP7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 REG1BP48304 166 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 VMA21Q3ZAQ7 101 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MIR17HGQ75NE6 70 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TGIF2LXQ8IUE1 241 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 PNKDQ8N490 385 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR5T1Q8NG75 326 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR4P4Q8NGL7 312 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR4C13Q8NGP0 309 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR2T10Q8NGZ9 312 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 OR4X1Q8NH49 305 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 CACNG8Q8WXS5 425 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 ST6GALNAC6Q969X2 333 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 FAM122AQ96E09 287 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 BTF3L4Q96K17 158 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 C19orf24Q9BVV8 132 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 NIT2Q9NQR4 276 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TMEM167BQ9NRX6 74 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 GAR1Q9NY12 217 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 TECRQ9NZ01 308 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 MSRB2Q9Y3D2 182 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 COL6A3P12111 3177 aa7.58□□□□□ -1.2
CDK5RAP3-208ENST00000578525 WDFY3Q8IZQ1 3526 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms