RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 C19orf35Q6ZS72 473 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 H2BFWTQ7Z2G1 175 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 TOMM5Q8N4H5 51 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 OR1L8Q8NGR8 309 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 DEDD2Q8WXF8 326 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 SRRQ9GZT4 340 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 TMEM14BQ9NUH8 114 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 FKBP11Q9NYL4 201 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 PRNDQ9UKY0 176 aa14.87□□□□□ -0.03
SS18-208ENST00000577751 DBX1A6NMT0 343 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 C15orf61A6NNL5 157 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 OVOL1O14753 267 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 DHFRP00374 187 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 IGKV1-5P01602 117 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 PRB2P02812 416 aaPredicted RBP14.86□□□□□ -0.03
SS18-208ENST00000577751 TRAPPC2P0DI81 140 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 TRAPPC2BP0DI82 140 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 HOXD3P31249 432 aaPredicted RBP14.86□□□□□ -0.03
SS18-208ENST00000577751 AP3S2P59780 193 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 KRTAP10-11P60412 298 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 ATP5G2Q06055 141 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 SP6Q3SY56 376 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 C9orf66Q5T8R8 295 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 REC114Q7Z4M0 266 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 HSD17B13Q7Z5P4 300 aaPredicted RBP14.86□□□□□ -0.03
SS18-208ENST00000577751 OR10W1Q8NGF6 305 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 OR5B3Q8NH48 314 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 MCUBQ9NWR8 336 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 PEF1Q9UBV8 284 aaKnown RBP14.86□□□□□ -0.03
SS18-208ENST00000577751 OR51B2Q9Y5P1 312 aa14.86□□□□□ -0.03
SS18-208ENST00000577751 ANKRD34BA5PLL1 514 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 SEC14L6B5MCN3 397 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 OR2J3O76001 311 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 REG1AP05451 166 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 P0C879 139 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 HIST1H1BP16401 226 aaKnown RBP14.85□□□□□ -0.03
SS18-208ENST00000577751 FAUP35544 74 aaKnown RBP14.85□□□□□ -0.03
SS18-208ENST00000577751 WT1-ASQ06250 92 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 GLYATL2Q8WU03 294 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 SCGB3A2Q96PL1 93 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 NAA60Q9H7X0 242 aa14.85□□□□□ -0.03
SS18-208ENST00000577751 AURKAIP1Q9NWT8 199 aaPredicted RBP14.85□□□□□ -0.03
SS18-208ENST00000577751 IGLV11-55A0A075B6I3 123 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 CRYM-AS1A6NIL9 109 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 CDS2O95674 445 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 TRBV12-3P01733 135 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 ZP3P21754 424 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 C15orf32Q32M92 178 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 SDHCQ99643 169 aaPredicted RBP14.84□□□□□ -0.03
SS18-208ENST00000577751 TMEM222Q9H0R3 208 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 FBXL7Q9UJT9 491 aa14.84□□□□□ -0.03
SS18-208ENST00000577751 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.83□□□□□ -0.04
SS18-208ENST00000577751 TEX13DA0A0J9YY54 714 aaPredicted RBP14.83□□□□□ -0.04
SS18-208ENST00000577751 ATG12O94817 140 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 NDUFB8O95169 186 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 OR5AC1P0C628 307 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 EXOSC2Q13868 293 aaKnown RBP14.83□□□□□ -0.04
SS18-208ENST00000577751 KLF5Q13887 457 aaPredicted RBP14.83□□□□□ -0.04
SS18-208ENST00000577751 BAK1Q16611 211 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 TRIM16LQ309B1 348 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 OR4A16Q8NH70 328 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 LSM10Q969L4 123 aaKnown RBP14.83□□□□□ -0.04
SS18-208ENST00000577751 TMEM230Q96A57 120 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 DMRT1Q9Y5R6 373 aa14.83□□□□□ -0.04
SS18-208ENST00000577751 A6NHS1 94 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 OR13C7P0DN81 318 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 DEFA4P12838 97 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 INSL3P51460 131 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 DHODHQ02127 395 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 IZUMO4Q1ZYL8 232 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 FAM209BQ5JX69 171 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 ACSM6Q6P461 480 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 ZNF429Q86V71 674 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 LHFPL5Q8TAF8 219 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 GALNT14Q96FL9 552 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 TMEM56Q96MV1 263 aa14.82□□□□□ -0.04
SS18-208ENST00000577751 A0A0B4J293 547 aa14.81□□□□□ -0.04
SS18-208ENST00000577751 AKR1C2P52895 323 aa14.81□□□□□ -0.04
SS18-208ENST00000577751 HSPE1P61604 102 aaKnown RBP14.81□□□□□ -0.04
SS18-208ENST00000577751 HINT2Q9BX68 163 aa14.81□□□□□ -0.04
SS18-208ENST00000577751 ZMAT5Q9UDW3 170 aaKnown RBP14.81□□□□□ -0.04
SS18-208ENST00000577751 DNAH3Q8TD57 4116 aa14.81□□□□□ -0.04
SS18-208ENST00000577751 A0A0G2JRQ6 117 aa14.8□□□□□ -0.04
SS18-208ENST00000577751 BMPR1BO00238 502 aa14.8□□□□□ -0.04
SS18-208ENST00000577751 PRCDQ00LT1 54 aa14.8□□□□□ -0.04
SS18-208ENST00000577751 SGPP2Q8IWX5 399 aa14.8□□□□□ -0.04
SS18-208ENST00000577751 SELENOHQ8IZQ5 122 aaKnown RBP14.8□□□□□ -0.04
SS18-208ENST00000577751 RBPMSQ93062 196 aaKnown RBP14.8□□□□□ -0.04
SS18-208ENST00000577751 KCNIP3Q9Y2W7 256 aa14.8□□□□□ -0.04
SS18-208ENST00000577751 F11RQ9Y624 299 aaKnown RBP14.8□□□□□ -0.04
SS18-208ENST00000577751 TMEM56-RWDD3S4R434 201 aa14.8□□□□□ -0.04
SS18-208ENST00000577751 MFAP2P55001 183 aa14.79□□□□□ -0.04
SS18-208ENST00000577751 SUPT4H1P63272 117 aaKnown RBP14.79□□□□□ -0.04
SS18-208ENST00000577751 TMEM187Q14656 261 aa14.79□□□□□ -0.04
SS18-208ENST00000577751 ZNF57Q68EA5 555 aaPredicted RBP14.79□□□□□ -0.04
SS18-208ENST00000577751 FAM219AQ8IW50 185 aa14.79□□□□□ -0.04
SS18-208ENST00000577751 RRNAD1Q96FB5 475 aaKnown RBP14.79□□□□□ -0.04
SS18-208ENST00000577751 CXorf58Q96LI9 332 aa14.79□□□□□ -0.04
SS18-208ENST00000577751 CCDC140Q96MF4 163 aa14.79□□□□□ -0.04
SS18-208ENST00000577751 SLC25A21Q9BQT8 299 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms