RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 A0A1B0GW64 132 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 IGHV3-11P01762 117 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 SERPINE2P07093 398 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 ZP3P21754 424 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 PSMB6P28072 239 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 SEC22AQ96IW7 307 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 SLC25A21Q9BQT8 299 aaPredicted RBP10.47□□□□□ -0.73
CIITA-210ENST00000575513 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
CIITA-210ENST00000575513 WDR12Q9GZL7 423 aaKnown RBP10.47□□□□□ -0.73
CIITA-210ENST00000575513 PRNDQ9UKY0 176 aa10.47□□□□□ -0.73
CIITA-210ENST00000575513 C3orf85A0A1B0GTC6 90 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 HMX3A6NHT5 357 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 CGB1A6NKQ9 187 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 SEC14L6B5MCN3 397 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 OVOL1O14753 267 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 SNAPC5O75971 98 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 ATG12O94817 140 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 HIST1H1BP16401 226 aaKnown RBP10.46□□□□□ -0.73
CIITA-210ENST00000575513 CTRB1P17538 263 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 G6PCP35575 357 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 RHOGP84095 191 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 ATP5G2Q06055 141 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 CTRB2Q6GPI1 263 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 ZNF429Q86V71 674 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 OR1L8Q8NGR8 309 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 OR5B3Q8NH48 314 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 DCUN1D4Q92564 292 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 DLX4Q92988 240 aaPredicted RBP10.46□□□□□ -0.73
CIITA-210ENST00000575513 NDUFA4L2Q9NRX3 87 aa10.46□□□□□ -0.73
CIITA-210ENST00000575513 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
CIITA-210ENST00000575513 PRKDCP78527 4128 aaKnown RBP10.46□□□□□ -0.74
CIITA-210ENST00000575513 TEX50A0A1B0GTY4 177 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 IGLC7A0M8Q6 106 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 CRYM-AS1A6NIL9 109 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 RBMXL2O75526 392 aaKnown RBP10.45□□□□□ -0.74
CIITA-210ENST00000575513 TRAPPC2P0DI81 140 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 TRAPPC2BP0DI82 140 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 UCP1P25874 307 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 KRTAP10-11P60412 298 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 ZNF846Q147U1 533 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 FANCD2OSQ96PS1 177 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 TP53RKQ96S44 253 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 NAA60Q9H7X0 242 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 TMEM14BQ9NUH8 114 aa10.45□□□□□ -0.74
CIITA-210ENST00000575513 AURKAIP1Q9NWT8 199 aaPredicted RBP10.45□□□□□ -0.74
CIITA-210ENST00000575513 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.44□□□□□ -0.74
CIITA-210ENST00000575513 TEX13DA0A0J9YY54 714 aaPredicted RBP10.44□□□□□ -0.74
CIITA-210ENST00000575513 CENPXA8MT69 81 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 PLA2G10O15496 165 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 CYB5BO43169 146 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 IGKV1-39P01597 117 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 PRH1P02810 166 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 IGKV1D-39P04432 117 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 DEFA4P12838 97 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 AREGP15514 252 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
CIITA-210ENST00000575513 SLURP1P55000 103 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 KLF5Q13887 457 aaPredicted RBP10.44□□□□□ -0.74
CIITA-210ENST00000575513 RBMS2Q15434 407 aaKnown RBP10.44□□□□□ -0.74
CIITA-210ENST00000575513 C15orf32Q32M92 178 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 ACSM6Q6P461 480 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 H2BFWTQ7Z2G1 175 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 TMEM230Q96A57 120 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 GALNT14Q96FL9 552 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 TMEM222Q9H0R3 208 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 OR51B2Q9Y5P1 312 aa10.44□□□□□ -0.74
CIITA-210ENST00000575513 IGLV11-55A0A075B6I3 123 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 C15orf61A6NNL5 157 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 MYOD1P15172 320 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 BTCP35070 178 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 DHODHQ02127 395 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 TATDN3Q17R31 274 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 SGPP2Q8IWX5 399 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 OR1L6Q8NGR2 347 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 OR4A16Q8NH70 328 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 GLYATL2Q8WU03 294 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 LSM10Q969L4 123 aaKnown RBP10.43□□□□□ -0.74
CIITA-210ENST00000575513 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 ELOVL1Q9BW60 279 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 THYN1Q9P016 225 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 FBXL7Q9UJT9 491 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
CIITA-210ENST00000575513 LINC00854A0A1B0GVQ3 168 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 ANKRD34BA5PLL1 514 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 LYRM1O43325 122 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 OR2J3O76001 311 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 NDUFB6O95139 128 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 CDS2O95674 445 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 PRB2P02812 416 aaPredicted RBP10.42□□□□□ -0.74
CIITA-210ENST00000575513 OR5AC1P0C628 307 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 P0C879 139 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 DCTN2Q13561 401 aaKnown RBP10.42□□□□□ -0.74
CIITA-210ENST00000575513 EXOSC2Q13868 293 aaKnown RBP10.42□□□□□ -0.74
CIITA-210ENST00000575513 SP6Q3SY56 376 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 CXorf58Q96LI9 332 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
CIITA-210ENST00000575513 TRBV7-1A0A0A6YYK4 115 aa10.41□□□□□ -0.74
CIITA-210ENST00000575513 UPK1BO75841 260 aa10.41□□□□□ -0.74
CIITA-210ENST00000575513 OR13C7P0DN81 318 aa10.41□□□□□ -0.74
CIITA-210ENST00000575513 CCR6P51684 374 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms