RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CCL24O00175 119 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 NDUFB6O95139 128 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 HIST1H1BP16401 226 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 CD33P20138 364 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 VAMP1P23763 118 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 PSMB6P28072 239 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 MECP2P51608 486 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 RUNX1Q01196 453 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMEM187Q14656 261 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 MZT2BQ6NZ67 158 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 C18orf65Q6ZTR6 163 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 ZNF429Q86V71 674 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 FAM223AQ8IWN6 122 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 LGI3Q8N145 548 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 CASTOR1Q8WTX7 329 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 DPF1Q92782 380 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 LSM10Q969L4 123 aaKnown RBP9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMEM230Q96A57 120 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 NDUFA4L2Q9NRX3 87 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 THYN1Q9P016 225 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 CACFD1Q9UGQ2 172 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 TMEM56-RWDD3S4R434 201 aa9.93□□□□□ -0.82
TRAPPC1-206ENST00000573989 I3L521 148 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 IGKV1-5P01602 117 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 CRYGCP07315 174 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 LGALS1P09382 135 aaKnown RBP9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 MYOD1P15172 320 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 HSPE1P61604 102 aaKnown RBP9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 KIAA0141Q14154 515 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 FAM209BQ5JX69 171 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 SELENOHQ8IZQ5 122 aaKnown RBP9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 NECAP1Q8NC96 275 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR11H1Q8NG94 326 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR1L6Q8NGR2 347 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 GNB4Q9HAV0 340 aa9.92□□□□□ -0.82
TRAPPC1-206ENST00000573989 TRBV9A0A0B4J1U6 114 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 A0A0B4J2A0 478 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 DUXBA0A1W2PPF3 345 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 UPK1BO75841 260 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 IFNA17P01571 189 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 IGHV3-11P01762 117 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR8U8P0C7N1 319 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR13C7P0DN81 318 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 AREGP15514 252 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 CTRB1P17538 263 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 SUPT4H1P63272 117 aaKnown RBP9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 RHOGP84095 191 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 ATP5G2Q06055 141 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 ZNF616Q08AN1 781 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 CTRB2Q6GPI1 263 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 SLC35G3Q8N808 338 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR1N2Q8NGR9 330 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 RAX2Q96IS3 184 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR5B12Q96R08 314 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 PLEKHA3Q9HB20 300 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 RANGRFQ9HD47 186 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 ENY2Q9NPA8 101 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 SHPKQ9UHJ6 478 aa9.91□□□□□ -0.82
TRAPPC1-206ENST00000573989 MGAM2Q2M2H8 2515 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 FAM240BA0A1B0GVZ2 78 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 A0A1B0GW64 132 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 CGB1A6NKQ9 187 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 LINC01619G3V211 115 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 PLA2G10O15496 165 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 SFT2D2O95562 160 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 DUS4LO95620 317 aaKnown RBP9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 HSPB1P04792 205 aaKnown RBP9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 REG1AP05451 166 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 P0C879 139 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 ERHP84090 104 aaKnown RBP9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 PRCDQ00LT1 54 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 DEFB136Q30KP8 78 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 WFDC9Q8NEX5 89 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 OR10W1Q8NGF6 305 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 LHFPL5Q8TAF8 219 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 RCC1LQ96I51 464 aaKnown RBP9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 P2RX4Q99571 388 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 MCRIP2Q9BUT9 160 aaKnown RBP9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 GPR61Q9BZJ8 451 aa9.9□□□□□ -0.82
TRAPPC1-206ENST00000573989 PKD1L1Q8TDX9 2849 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 A0A0B4J293 547 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 OR2J3O76001 311 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 HLA-AP01891 365 aaKnown RBP9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 PRH1P02810 166 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 SULT1A3P0DMM9 295 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 SULT1A4P0DMN0 295 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 BTCP35070 178 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 DEFA1P59665 94 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 DEFA3P59666 94 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 ASAH1Q13510 395 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 PPP1R1AQ13522 171 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 IZUMO4Q1ZYL8 232 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 C15orf32Q32M92 178 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 C4orf46Q504U0 113 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 LINC00482Q8N8I6 264 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 OR52E5Q8NH55 327 aa9.89□□□□□ -0.83
TRAPPC1-206ENST00000573989 COQ8AQ8NI60 647 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms