RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 BTCP35070 178 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 MYCNOSP40205 109 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 SUPT4H1P63272 117 aaKnown RBP12.23□□□□□ -0.45
CHD3-215ENST00000572750 RUNX1Q01196 453 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 FHL3Q13643 280 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 LINC00299Q6ZSB3 139 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 SGPP2Q8IWX5 399 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 CADM3Q8N126 398 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 OR11H1Q8NG94 326 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 OR1L8Q8NGR8 309 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 OR4A16Q8NH70 328 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
CHD3-215ENST00000572750 GLYATL2Q8WU03 294 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 TSC22D3Q99576 134 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 TMEM14BQ9NUH8 114 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 PRNDQ9UKY0 176 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 BIRC6Q9NR09 4857 aa12.23□□□□□ -0.45
CHD3-215ENST00000572750 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 C13orf42A0A1B0GVH6 325 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 G3V4G9 280 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 BRI3O95415 125 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 PSMB6P28072 239 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 RHOGP84095 191 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 RBMS2Q15434 407 aaKnown RBP12.22□□□□□ -0.45
CHD3-215ENST00000572750 TMEM268Q5VZI3 342 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 SLC25A42Q86VD7 318 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 RBPMSQ93062 196 aaKnown RBP12.22□□□□□ -0.45
CHD3-215ENST00000572750 SLC25A21Q9BQT8 299 aaPredicted RBP12.22□□□□□ -0.45
CHD3-215ENST00000572750 NDUFA4L2Q9NRX3 87 aa12.22□□□□□ -0.45
CHD3-215ENST00000572750 NOTCH3Q9UM47 2321 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 IGHV4OR15-8A0A075B7B6 117 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 A0A087WW49 117 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 NAP1L6A6NFF2 107 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 OR2J3O76001 311 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 ATG12O94817 140 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 CDS2O95674 445 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 TRAPPC2P0DI81 140 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 TRAPPC2BP0DI82 140 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 IGLL1P15814 213 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 CTRB1P17538 263 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 DHODHQ02127 395 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 WT1-ASQ06250 92 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 ZNF616Q08AN1 781 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 TMEM187Q14656 261 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 CTRB2Q6GPI1 263 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
CHD3-215ENST00000572750 OR1N2Q8NGR9 330 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 OR5B3Q8NH48 314 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 S100ZQ8WXG8 99 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 LSM10Q969L4 123 aaKnown RBP12.21□□□□□ -0.45
CHD3-215ENST00000572750 RRNAD1Q96FB5 475 aaKnown RBP12.21□□□□□ -0.45
CHD3-215ENST00000572750 GALNT14Q96FL9 552 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 CCDC32Q9BV29 185 aa12.21□□□□□ -0.45
CHD3-215ENST00000572750 TRBV9A0A0B4J1U6 114 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 A0A0B4J293 547 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 A0A0G2JLM5 398 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 FAM223BA6NKX1 122 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 CRYGCP07315 174 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 OR13C7P0DN81 318 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 DEFA4P12838 97 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 VAMP1P23763 118 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 MECP2P51608 486 aaKnown RBP12.2□□□□□ -0.46
CHD3-215ENST00000572750 SLURP1P55000 103 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 EXOSC2Q13868 293 aaKnown RBP12.2□□□□□ -0.46
CHD3-215ENST00000572750 OXLD1Q5BKU9 147 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 SPINK9Q5DT21 86 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 THOC7Q6I9Y2 204 aaKnown RBP12.2□□□□□ -0.46
CHD3-215ENST00000572750 FAM223AQ8IWN6 122 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 CENPSQ8N2Z9 138 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 WFDC9Q8NEX5 89 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 FANCD2OSQ96PS1 177 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 C7orf50Q9BRJ6 194 aaKnown RBP12.2□□□□□ -0.46
CHD3-215ENST00000572750 SRSF8Q9BRL6 282 aaKnown RBP12.2□□□□□ -0.46
CHD3-215ENST00000572750 FKBP11Q9NYL4 201 aa12.2□□□□□ -0.46
CHD3-215ENST00000572750 ANKRD34BA5PLL1 514 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 CENPXA8MT69 81 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 PLA2G10O15496 165 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 NDUFB6O95139 128 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 C15orf32Q32M92 178 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 SAMD5Q5TGI4 173 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 DPF1Q92782 380 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 USMG5Q96IX5 58 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 TMEM56Q96MV1 263 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 FLVCR2Q9UPI3 526 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 KCNIP3Q9Y2W7 256 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 S4R3C0 116 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 TMEM56-RWDD3S4R434 201 aa12.19□□□□□ -0.46
CHD3-215ENST00000572750 IGLV11-55A0A075B6I3 123 aa12.18□□□□□ -0.46
CHD3-215ENST00000572750 LINC01619G3V211 115 aa12.18□□□□□ -0.46
CHD3-215ENST00000572750 ST8SIA3O43173 380 aa12.18□□□□□ -0.46
CHD3-215ENST00000572750 LYRM1O43325 122 aa12.18□□□□□ -0.46
CHD3-215ENST00000572750 DHFRP00374 187 aa12.18□□□□□ -0.46
CHD3-215ENST00000572750 ANXA3P12429 323 aa12.18□□□□□ -0.46
CHD3-215ENST00000572750 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
CHD3-215ENST00000572750 ATP5G2Q06055 141 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms