RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 DMBX1Q8NFW5 382 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 CACNG8Q8WXS5 425 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 MRGPRFQ96AM1 343 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 EEF1AKMT3Q96AZ1 226 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 SEC22AQ96IW7 307 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 ABHD1Q96SE0 405 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 MRPS26Q9BYN8 205 aaKnown RBP5.9□□□□□ -1.46
CDH3-209ENST00000569080 COMMD5Q9GZQ3 224 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 MIXL1Q9H2W2 232 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 TMEM14BQ9NUH8 114 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 PEMTQ9UBM1 199 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 KLK11Q9UBX7 282 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 NSG2Q9Y328 171 aa5.9□□□□□ -1.46
CDH3-209ENST00000569080 TRBV7-1A0A0A6YYK4 115 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 TEX50A0A1B0GTY4 177 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 SMIM31A0A1B0GVY4 71 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 C15orf61A6NNL5 157 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 TPPPO94811 219 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 KRASP01116 189 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 CD7P09564 240 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 P0C879 139 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 ZNF182P17025 639 aaPredicted RBP5.89□□□□□ -1.47
CDH3-209ENST00000569080 GPR183P32249 361 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 LPAR6P43657 344 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 ERVK-16P61578 105 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 RND3P61587 244 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 SPCS2Q15005 226 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 TATDN3Q17R31 274 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 DEFB114Q30KQ6 69 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 RNASE12Q5GAN4 147 aaKnown RBP5.89□□□□□ -1.47
CDH3-209ENST00000569080 HSD17B13Q7Z5P4 300 aaPredicted RBP5.89□□□□□ -1.47
CDH3-209ENST00000569080 TBC1D26Q86UD7 250 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 LAX1Q8IWV1 398 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 SGPP2Q8IWX5 399 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 SLC38A6Q8IZM9 456 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 OR4D10Q8NGI6 311 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 OR1L8Q8NGR8 309 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 OR52I2Q8NH67 350 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 AP3S1Q92572 193 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 LSM10Q969L4 123 aaKnown RBP5.89□□□□□ -1.47
CDH3-209ENST00000569080 CXorf58Q96LI9 332 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 WFDC10AQ9H1F0 79 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 EDA2RQ9HAV5 297 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 EXTL2Q9UBQ6 330 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 MTFP1Q9UDX5 166 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 MLXQ9UH92 298 aa5.89□□□□□ -1.47
CDH3-209ENST00000569080 F11RQ9Y624 299 aaKnown RBP5.89□□□□□ -1.47
CDH3-209ENST00000569080 K7EIM0 57 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TGOLN2O43493 480 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 CD74P04233 296 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 CD3DP04234 171 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 CLEC3BP05452 202 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 SERPINE2P07093 398 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TRAPPC2P0DI81 140 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TRAPPC2BP0DI82 140 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 C8orf88P0DMB2 117 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 OR13C7P0DN81 318 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 DEFA4P12838 97 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TBPP20226 339 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 CBLN1P23435 193 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 CD81P60033 236 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TSPAN5P62079 268 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 HAGHQ16775 308 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 GTSCR1Q86UQ5 136 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TMEM61Q8N0U2 210 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 ARRDC1Q8N5I2 433 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 OR5B3Q8NH48 314 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 VN1R17PQ8TDU5 208 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 DYNLRB2Q8TF09 96 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TMEM190Q8WZ59 177 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 WDR89Q96FK6 387 aaPredicted RBP5.88□□□□□ -1.47
CDH3-209ENST00000569080 ZNF436Q9C0F3 470 aaPredicted RBP5.88□□□□□ -1.47
CDH3-209ENST00000569080 PLEKHA3Q9HB20 300 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TECRQ9NZ01 308 aaKnown RBP5.88□□□□□ -1.47
CDH3-209ENST00000569080 PRNDQ9UKY0 176 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 OR51B2Q9Y5P1 312 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 TENM2Q9NT68 2774 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 DNAH1Q9P2D7 4330 aa5.88□□□□□ -1.47
CDH3-209ENST00000569080 FAM25AB3EWG3 89 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 FAM25CB3EWG5 89 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 FAM25GB3EWG6 89 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 C3orf84H3BNL1 204 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 CTDSP2O14595 271 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 IGKV1-5P01602 117 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 PI3P19957 117 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 ADMP35318 185 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 TM4SF20Q53R12 229 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 RNASE10Q5GAN6 216 aaKnown RBP5.87□□□□□ -1.47
CDH3-209ENST00000569080 LPCAT3Q6P1A2 487 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 MZT2AQ6P582 158 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 BTNL8Q6UX41 500 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 GPR141Q7Z602 305 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 ZNF114Q8NC26 417 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 MUC7Q8TAX7 377 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 DYNC2LI1Q8TCX1 351 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 ZNF486Q96H40 463 aaPredicted RBP5.87□□□□□ -1.47
CDH3-209ENST00000569080 CITED4Q96RK1 184 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 TP53RKQ96S44 253 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 ATP6V0BQ99437 205 aa5.87□□□□□ -1.47
CDH3-209ENST00000569080 TSC22D3Q99576 134 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms