RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 TMEM56Q96MV1 263 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 WDR12Q9GZL7 423 aaKnown RBP16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 NDUFA4L2Q9NRX3 87 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 KLK9Q9UKQ9 250 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 TMEM56-RWDD3S4R434 201 aa16.34■□□□□ 0.21
SHCBP1-205ENST00000566016 TEX50A0A1B0GTY4 177 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 DHFRP00374 187 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 TRAPPC2P0DI81 140 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 TRAPPC2BP0DI82 140 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 AREGP15514 252 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 CTRB1P17538 263 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 PSMB6P28072 239 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 CTRB2Q6GPI1 263 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 ZNF429Q86V71 674 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 LINC00482Q8N8I6 264 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 NSG2Q9Y328 171 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 OR51B2Q9Y5P1 312 aa16.33■□□□□ 0.2
SHCBP1-205ENST00000566016 PIGBOS1A0A0B4J2F0 54 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 FAM223BA6NKX1 122 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 NDUFB6O95139 128 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 ANXA3P12429 323 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 AKR1C4P17516 323 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 SRPXP78539 464 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 DEFB136Q30KP8 78 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 FAM223AQ8IWN6 122 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 MRPL41Q8IXM3 137 aaKnown RBP16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 OR4A16Q8NH70 328 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 LHFPL5Q8TAF8 219 aa16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 LSM10Q969L4 123 aaKnown RBP16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 RRNAD1Q96FB5 475 aaKnown RBP16.32■□□□□ 0.2
SHCBP1-205ENST00000566016 BTCP35070 178 aa16.31■□□□□ 0.2
SHCBP1-205ENST00000566016 CCR6P51684 374 aa16.31■□□□□ 0.2
SHCBP1-205ENST00000566016 UBE2MP61081 183 aaKnown RBP16.31■□□□□ 0.2
SHCBP1-205ENST00000566016 TMEM187Q14656 261 aa16.31■□□□□ 0.2
SHCBP1-205ENST00000566016 TMED4Q7Z7H5 227 aa16.31■□□□□ 0.2
SHCBP1-205ENST00000566016 CENPSQ8N2Z9 138 aa16.31■□□□□ 0.2
SHCBP1-205ENST00000566016 NECAP1Q8NC96 275 aa16.31■□□□□ 0.2
SHCBP1-205ENST00000566016 C13orf42A0A1B0GVH6 325 aa16.3■□□□□ 0.2
SHCBP1-205ENST00000566016 DBX1A6NMT0 343 aa16.3■□□□□ 0.2
SHCBP1-205ENST00000566016 CD33P20138 364 aa16.3■□□□□ 0.2
SHCBP1-205ENST00000566016 ZNF616Q08AN1 781 aa16.3■□□□□ 0.2
SHCBP1-205ENST00000566016 OR11H1Q8NG94 326 aa16.3■□□□□ 0.2
SHCBP1-205ENST00000566016 MEGF8Q7Z7M0 2845 aa16.3■□□□□ 0.2
SHCBP1-205ENST00000566016 PLA2G10O15496 165 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 OR8U8P0C7N1 319 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 RHOGP84095 191 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 ZNF846Q147U1 533 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 TMEM268Q5VZI3 342 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 SELENOHQ8IZQ5 122 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 OR5B12Q96R08 314 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 A0A0B4J293 547 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 LINC00854A0A1B0GVQ3 168 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 LYRM1O43325 122 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 DUS4LO95620 317 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 HIST1H1BP16401 226 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 PRCDQ00LT1 54 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 WT1-ASQ06250 92 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 AARDQ4LEZ3 155 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 OR10W1Q8NGF6 305 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 OR1N2Q8NGR9 330 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 RNASE11Q8TAA1 199 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 RCC1LQ96I51 464 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 FANCD2OSQ96PS1 177 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 DUX3Q96PT4 197 aa16.29■□□□□ 0.2
SHCBP1-205ENST00000566016 A0A0B4J2A0 478 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 A0A0G2JRQ6 117 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 RBMXL2O75526 392 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 IGHV3-11P01762 117 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 PRH1P02810 166 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 HSPE1P61604 102 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 IZUMO4Q1ZYL8 232 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 FAM209BQ5JX69 171 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 ZNF343Q6P1L6 599 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 LGI3Q8N145 548 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 SHPKQ9UHJ6 478 aa16.28■□□□□ 0.2
SHCBP1-205ENST00000566016 IGLV11-55A0A075B6I3 123 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 CYB5BO43169 146 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 REG1AP05451 166 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 OR13C7P0DN81 318 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 DEFA4P12838 97 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 SLC35G3Q8N808 338 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 LRTM2Q8N967 370 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 HINT2Q9BX68 163 aa16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 ALX4Q9H161 411 aaPredicted RBP16.27■□□□□ 0.19
SHCBP1-205ENST00000566016 DUXBA0A1W2PPF3 345 aa16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 INS-IGF2F8WCM5 200 aa16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 HSPB1P04792 205 aaKnown RBP16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 VAMP1P23763 118 aa16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 C15orf32Q32M92 178 aa16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 C19orf35Q6ZS72 473 aa16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 DPF1Q92782 380 aa16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 MCRIP2Q9BUT9 160 aaKnown RBP16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 RANGRFQ9HD47 186 aaPredicted RBP16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 CACFD1Q9UGQ2 172 aa16.26■□□□□ 0.19
SHCBP1-205ENST00000566016 LINC01619G3V211 115 aa16.25■□□□□ 0.19
SHCBP1-205ENST00000566016 ST8SIA3O43173 380 aa16.25■□□□□ 0.19
SHCBP1-205ENST00000566016 UPK1BO75841 260 aa16.25■□□□□ 0.19
SHCBP1-205ENST00000566016 OR2J3O76001 311 aa16.25■□□□□ 0.19
SHCBP1-205ENST00000566016 DEFA5Q01523 94 aa16.25■□□□□ 0.19
SHCBP1-205ENST00000566016 ATP5G2Q06055 141 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms