RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 OR5B12Q96R08 314 aa12.44□□□□□ -0.42
RAB40C-208ENST00000564703 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 NPIPB5A8MRT5 1133 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 TEX22C9J3V5 150 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 CCL24O00175 119 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 PLA2G10O15496 165 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 IGKV1-5P01602 117 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 CD33P20138 364 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 PSMB6P28072 239 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 KIAA0141Q14154 515 aaPredicted RBP12.43□□□□□ -0.42
RAB40C-208ENST00000564703 TMEM187Q14656 261 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 C18orf65Q6ZTR6 163 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 IL22RA2Q969J5 263 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 TMEM14BQ9NUH8 114 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 TMEM56-RWDD3S4R434 201 aa12.43□□□□□ -0.42
RAB40C-208ENST00000564703 IFNA17P01571 189 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 IGHV3-11P01762 117 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 OR13C7P0DN81 318 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 AREGP15514 252 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 HIST1H1BP16401 226 aaKnown RBP12.42□□□□□ -0.42
RAB40C-208ENST00000564703 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
RAB40C-208ENST00000564703 HSPE1P61604 102 aaKnown RBP12.42□□□□□ -0.42
RAB40C-208ENST00000564703 ATP5G2Q06055 141 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 NECAP1Q8NC96 275 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 OR11H1Q8NG94 326 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 OR1N2Q8NGR9 330 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
RAB40C-208ENST00000564703 GNB4Q9HAV0 340 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 NDUFA4L2Q9NRX3 87 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
RAB40C-208ENST00000564703 THYN1Q9P016 225 aa12.42□□□□□ -0.42
RAB40C-208ENST00000564703 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 SFT2D2O95562 160 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 PRH1P02810 166 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 REG1AP05451 166 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 CRYGCP07315 174 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 SUPT4H1P63272 117 aaKnown RBP12.41□□□□□ -0.42
RAB40C-208ENST00000564703 ERHP84090 104 aaKnown RBP12.41□□□□□ -0.42
RAB40C-208ENST00000564703 RHOGP84095 191 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 RUNX1Q01196 453 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 IZUMO4Q1ZYL8 232 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 ZNF429Q86V71 674 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 FAM223AQ8IWN6 122 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 OR10W1Q8NGF6 305 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 RAX2Q96IS3 184 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 ENY2Q9NPA8 101 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 CACFD1Q9UGQ2 172 aa12.41□□□□□ -0.42
RAB40C-208ENST00000564703 A0A0B4J293 547 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 A0A0B4J2A0 478 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 FAM240BA0A1B0GVZ2 78 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 A0A1B0GW64 132 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 CGB1A6NKQ9 187 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 I3L521 148 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 UPK1BO75841 260 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 LGALS1P09382 135 aaKnown RBP12.4□□□□□ -0.42
RAB40C-208ENST00000564703 CTRB1P17538 263 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 ZNF616Q08AN1 781 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 CTRB2Q6GPI1 263 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 SLC25A24Q6NUK1 477 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 SLC35G3Q8N808 338 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 OR1L6Q8NGR2 347 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 LHFPL5Q8TAF8 219 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 GPR146Q96CH1 333 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 DUX3Q96PT4 197 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 PLEKHA3Q9HB20 300 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 SHPKQ9UHJ6 478 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 FBXL7Q9UJT9 491 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 FLVCR2Q9UPI3 526 aa12.4□□□□□ -0.42
RAB40C-208ENST00000564703 TRBV9A0A0B4J1U6 114 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 IGLC7A0M8Q6 106 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 DBX1A6NMT0 343 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 OR2J3O76001 311 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 TCRBP04435 133 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 HSPB1P04792 205 aaKnown RBP12.39□□□□□ -0.43
RAB40C-208ENST00000564703 OR8U8P0C7N1 319 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 P0C879 139 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 BTCP35070 178 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 PRCDQ00LT1 54 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 PPP1R1AQ13522 171 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 DEFB136Q30KP8 78 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 C4orf46Q504U0 113 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 P2RX4Q99571 388 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 RANGRFQ9HD47 186 aaPredicted RBP12.39□□□□□ -0.43
RAB40C-208ENST00000564703 PRR13Q9NZ81 148 aa12.39□□□□□ -0.43
RAB40C-208ENST00000564703 DUXBA0A1W2PPF3 345 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 ANKRD34BA5PLL1 514 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 LINC01619G3V211 115 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 ST8SIA3O43173 380 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 HLA-AP01891 365 aaKnown RBP12.38□□□□□ -0.43
RAB40C-208ENST00000564703 OR4E1P0C645 316 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 SULT1A3P0DMM9 295 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 SULT1A4P0DMN0 295 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 SNCAP37840 140 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 DEFA1P59665 94 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 DEFA3P59666 94 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 WT1-ASQ06250 92 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 ASAH1Q13510 395 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 FAM209BQ5JX69 171 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 LYZL2Q7Z4W2 148 aa12.38□□□□□ -0.43
RAB40C-208ENST00000564703 WFDC9Q8NEX5 89 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms