RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CCDC71LQ8N9Z2 235 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 OR10W1Q8NGF6 305 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 GLYATL2Q8WU03 294 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 TMEM222Q9H0R3 208 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 NAA60Q9H7X0 242 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 TMEM14BQ9NUH8 114 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 MCUBQ9NWR8 336 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 COPZ2Q9P299 210 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 SCP2D1Q9UJQ7 156 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 ZNF257Q9Y2Q1 563 aa6.58□□□□□ -1.36
UBR1-204ENST00000563239 IGLV11-55A0A075B6I3 123 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 A0A0B4J293 547 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 A0A0G2JLM5 398 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 TEX13DA0A0J9YY54 714 aaPredicted RBP6.57□□□□□ -1.36
UBR1-204ENST00000563239 C13orf42A0A1B0GVH6 325 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 C15orf61A6NNL5 157 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 LINC01619G3V211 115 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 OR2J3O76001 311 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 NDUFB8O95169 186 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 HSPB1P04792 205 aaKnown RBP6.57□□□□□ -1.36
UBR1-204ENST00000563239 SERPINE2P07093 398 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 OR5AC1P0C628 307 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 TRAPPC2P0DI81 140 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 TRAPPC2BP0DI82 140 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 SLURP1P55000 103 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 MFAP2P55001 183 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 RAB25P57735 213 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 AP3S2P59780 193 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 KRTAP10-11P60412 298 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 Q6ZRM9 215 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 SLC25A42Q86VD7 318 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 SELENOHQ8IZQ5 122 aaKnown RBP6.57□□□□□ -1.36
UBR1-204ENST00000563239 OR1L8Q8NGR8 309 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 DEDD2Q8WXF8 326 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 DCUN1D4Q92564 292 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 DLX4Q92988 240 aaPredicted RBP6.57□□□□□ -1.36
UBR1-204ENST00000563239 USMG5Q96IX5 58 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 SRSF8Q9BRL6 282 aaKnown RBP6.57□□□□□ -1.36
UBR1-204ENST00000563239 QTRT1Q9BXR0 403 aaKnown RBP6.57□□□□□ -1.36
UBR1-204ENST00000563239 COMMD5Q9GZQ3 224 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 PRNDQ9UKY0 176 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 C14orf166Q9Y224 244 aaKnown RBP6.57□□□□□ -1.36
UBR1-204ENST00000563239 OR51B2Q9Y5P1 312 aa6.57□□□□□ -1.36
UBR1-204ENST00000563239 ANKRD34BA5PLL1 514 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 FAM223BA6NKX1 122 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 B3GALNT1O75752 331 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 SNAPC5O75971 98 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 PRB2P02812 416 aaPredicted RBP6.56□□□□□ -1.36
UBR1-204ENST00000563239 OR8U8P0C7N1 319 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 IL7P13232 177 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 BTCP35070 178 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 FAUP35544 74 aaKnown RBP6.56□□□□□ -1.36
UBR1-204ENST00000563239 CCR6P51684 374 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 EGFEM1PQ0D2K5 195 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 TMEM187Q14656 261 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 ZNF57Q68EA5 555 aaPredicted RBP6.56□□□□□ -1.36
UBR1-204ENST00000563239 H2BFWTQ7Z2G1 175 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 FAM223AQ8IWN6 122 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 NECAP1Q8NC96 275 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 OR5B3Q8NH48 314 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 DPF1Q92782 380 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 GALNT14Q96FL9 552 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 TMEM56Q96MV1 263 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 TSC22D3Q99576 134 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 PRR13Q9NZ81 148 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 FBXL7Q9UJT9 491 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 TMEM56-RWDD3S4R434 201 aa6.56□□□□□ -1.36
UBR1-204ENST00000563239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 BMPR1BO00238 502 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 PLA2G10O15496 165 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 DUS4LO95620 317 aaKnown RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 OR13C7P0DN81 318 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 HOXD3P31249 432 aaPredicted RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 HSPE1P61604 102 aaKnown RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 DHODHQ02127 395 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 ATP5G2Q06055 141 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 EXOSC2Q13868 293 aaKnown RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 KLF5Q13887 457 aaPredicted RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 TRIM16LQ309B1 348 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 C15orf32Q32M92 178 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 AARDQ4LEZ3 155 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 THOC7Q6I9Y2 204 aaKnown RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 LINC00299Q6ZSB3 139 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 ZNF429Q86V71 674 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 OR4A16Q8NH70 328 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 GPR146Q96CH1 333 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 SCGB3A2Q96PL1 93 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 SLC25A21Q9BQT8 299 aaPredicted RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 MCRIP2Q9BUT9 160 aaKnown RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 HINT2Q9BX68 163 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 RANGRFQ9HD47 186 aaPredicted RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 FKBP11Q9NYL4 201 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 PEF1Q9UBV8 284 aaKnown RBP6.55□□□□□ -1.36
UBR1-204ENST00000563239 S4R3C0 116 aa6.55□□□□□ -1.36
UBR1-204ENST00000563239 LINC00854A0A1B0GVQ3 168 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 MFSD2BA6NFX1 497 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 SEC14L6B5MCN3 397 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 OVOL1O14753 267 aa6.54□□□□□ -1.36
UBR1-204ENST00000563239 ST8SIA3O43173 380 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms