RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 GPM6AP51674 278 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 PIGPP57054 158 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 RND3P61587 244 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 RPS23P62266 143 aaKnown RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 MRPS11P82912 194 aaKnown RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 GAGE5Q13069 117 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 GAGE6Q13070 117 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 EXOSC2Q13868 293 aaKnown RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 GNMTQ14749 295 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 OR8G1Q15617 311 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 IAH1Q2TAA2 248 aaPredicted RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 PAN3Q58A45 887 aaKnown RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 Q5BKY6 102 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 LY6G6FQ5SQ64 297 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 THOC7Q6I9Y2 204 aaKnown RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 HAGHLQ6PII5 290 aaPredicted RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 UQCC3Q6UW78 93 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 BTNL3Q6UXE8 466 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 FAM58AQ8N1B3 248 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 FAM71E2Q8N5Q1 922 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 EIF4E3Q8N5X7 224 aaKnown RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 TCTEX1D1Q8N7M0 179 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 ADAD2Q8NCV1 583 aaKnown RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 BHLHE23Q8NDY6 225 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 NUP37Q8NFH4 326 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 OR8G5Q8NG78 346 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 OR52B4Q8NGK2 314 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 OR1J1Q8NGS3 322 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 OR10K1Q8NGX5 313 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 OR10J5Q8NHC4 309 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 C8orf46Q8TAG6 207 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 FGFBP3Q8TAT2 258 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 STOML3Q8TAV4 291 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 RTN4IP1Q8WWV3 396 aaPredicted RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 CCL17Q92583 94 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 MOB3AQ96BX8 217 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 SEC22AQ96IW7 307 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 C17orf77Q96MU5 243 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 TMEM56Q96MV1 263 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 AQP10Q96PS8 301 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 NKX3-1Q99801 234 aaPredicted RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 SULT4A1Q9BR01 284 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 WDR13Q9H1Z4 485 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 NAA60Q9H7X0 242 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 HEXA-AS1Q9H8Q6 139 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 SDF2L1Q9HCN8 221 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 Q9N2K0 584 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 ZC4H2Q9NQZ6 224 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 RDH8Q9NYR8 311 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 ZNF230Q9UIE0 474 aaPredicted RBP2.52□□□□□ -2.01
SPG11-225ENST00000561391 NSG2Q9Y328 171 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 TMEM56-RWDD3S4R434 201 aa2.52□□□□□ -2.01
SPG11-225ENST00000561391 DYNC1H1Q14204 4646 aaKnown RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 BORCS7-ASMTA0A0B4J1R7 106 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 IGKV1-12A0A0C4DH73 117 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 A0A0U1RQK1 487 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 C3orf85A0A1B0GTC6 90 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 A0A1B0GU03 582 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 A0A1B0GWJ7 208 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 TMEM30CPA0ZSE6 113 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 RAB19A4D1S5 217 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 RNF222A6NCQ9 220 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 LEUTXA8MZ59 168 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 F8VVB4 439 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 F8VWA3 439 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 RNASEK-C17orf49H0YIS7 233 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 K7EPK0 472 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 GPR31O00270 319 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 RAMP3O60896 148 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 NXPH2O95156 264 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 SIX6O95475 246 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 PTBP3O95758 552 aaKnown RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 PPYP01298 95 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 IGKV1D-12P01611 117 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 IGLV1-44P01699 117 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 GAPDHP04406 335 aaKnown RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 SERPINE2P07093 398 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 PGA5P0DJD9 388 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 PPIAL4GP0DN37 164 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 RPS2P15880 293 aaKnown RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 PRKACAP17612 351 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 BCL3P20749 454 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 VDAC1P21796 283 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 CA6P23280 308 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 CFHR2P36980 270 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 WNT5AP41221 380 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 P2RY1P47900 373 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 LUMP51884 338 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 ARHGDIBP52566 201 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 LINC01547P58512 204 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 ERVK11-1P61568 191 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 SUPT4H1P63272 117 aaKnown RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 PAX5Q02548 391 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 PNRC1Q12796 327 aaPredicted RBP2.51□□□□□ -2.01
SPG11-225ENST00000561391 ZNF146Q15072 292 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 HFEQ30201 348 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 SMIM21Q3B7S5 101 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 TMEM30BQ3MIR4 351 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 PIGYQ3MUY2 71 aa2.51□□□□□ -2.01
SPG11-225ENST00000561391 C6orf183Q5T699 404 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms