RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 DPF1Q92782 380 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 PRRT1Q99946 306 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 QTRT1Q9BXR0 403 aaKnown RBP10.67□□□□□ -0.7
TPM1-230ENST00000561266 COMMD5Q9GZQ3 224 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 TMEM14BQ9NUH8 114 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 MCUBQ9NWR8 336 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 COPZ2Q9P299 210 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 KLK9Q9UKQ9 250 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 ZNF257Q9Y2Q1 563 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 OR51B2Q9Y5P1 312 aa10.67□□□□□ -0.7
TPM1-230ENST00000561266 A0A0B4J293 547 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 CRYM-AS1A6NIL9 109 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 C15orf61A6NNL5 157 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 FGF2P09038 288 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 OR8U8P0C7N1 319 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 TRAPPC2P0DI81 140 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 TRAPPC2BP0DI82 140 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 S100GP29377 79 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 SUPT4H1P63272 117 aaKnown RBP10.66□□□□□ -0.7
TPM1-230ENST00000561266 EGFEM1PQ0D2K5 195 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 SURF2Q15527 256 aaPredicted RBP10.66□□□□□ -0.7
TPM1-230ENST00000561266 PDLIM3Q53GG5 364 aaPredicted RBP10.66□□□□□ -0.7
TPM1-230ENST00000561266 SPANXN2Q5MJ10 180 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 TOMM5Q8N4H5 51 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 OR1L8Q8NGR8 309 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 HINT2Q9BX68 163 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 NAA60Q9H7X0 242 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 FBXL7Q9UJT9 491 aa10.66□□□□□ -0.7
TPM1-230ENST00000561266 IGLV11-55A0A075B6I3 123 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 A0A0G2JLM5 398 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 TEX13DA0A0J9YY54 714 aaPredicted RBP10.65□□□□□ -0.7
TPM1-230ENST00000561266 WI2-2373I1.2A0A1W2PRP0 233 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 SEC14L6B5MCN3 397 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 OVOL1O14753 267 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 SERPINE2P07093 398 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 ATP5G2Q06055 141 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 EXOSC2Q13868 293 aaKnown RBP10.65□□□□□ -0.7
TPM1-230ENST00000561266 C15orf32Q32M92 178 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 SPINK9Q5DT21 86 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 H2BFWTQ7Z2G1 175 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 SELENOHQ8IZQ5 122 aaKnown RBP10.65□□□□□ -0.7
TPM1-230ENST00000561266 CCDC71LQ8N9Z2 235 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 USMG5Q96IX5 58 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 CCDC140Q96MF4 163 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 TMEM222Q9H0R3 208 aa10.65□□□□□ -0.7
TPM1-230ENST00000561266 PEF1Q9UBV8 284 aaKnown RBP10.65□□□□□ -0.7
TPM1-230ENST00000561266 C14orf166Q9Y224 244 aaKnown RBP10.65□□□□□ -0.7
TPM1-230ENST00000561266 SORL1Q92673 2214 aa10.65□□□□□ -0.71
TPM1-230ENST00000561266 MFSD2BA6NFX1 497 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 FAM223BA6NKX1 122 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 PPP5D1E7EU14 171 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 K7EIL1 84 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 BMPR1BO00238 502 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 SNAPC5O75971 98 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 DUS4LO95620 317 aaKnown RBP10.64□□□□□ -0.71
TPM1-230ENST00000561266 CDS2O95674 445 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 HLA-AP01891 365 aaKnown RBP10.64□□□□□ -0.71
TPM1-230ENST00000561266 OR13C7P0DN81 318 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 KLF5Q13887 457 aaPredicted RBP10.64□□□□□ -0.71
TPM1-230ENST00000561266 TMEM187Q14656 261 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 TRIM16LQ309B1 348 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 CNPY1Q3B7I2 92 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 IL34Q6ZMJ4 242 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 HAPLN4Q86UW8 402 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 SLC25A42Q86VD7 318 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 FAM223AQ8IWN6 122 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 NECAP1Q8NC96 275 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 RANGRFQ9HD47 186 aaPredicted RBP10.64□□□□□ -0.71
TPM1-230ENST00000561266 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
TPM1-230ENST00000561266 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.63□□□□□ -0.71
TPM1-230ENST00000561266 LINC00854A0A1B0GVQ3 168 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 AKR1C4P17516 323 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 EDN2P20800 178 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 BTCP35070 178 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 ECI1P42126 302 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 CCR6P51684 374 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 ZNF57Q68EA5 555 aaPredicted RBP10.63□□□□□ -0.71
TPM1-230ENST00000561266 C11orf87Q6NUJ2 197 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 ACSM6Q6P461 480 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 GPR146Q96CH1 333 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 SRSF8Q9BRL6 282 aaKnown RBP10.63□□□□□ -0.71
TPM1-230ENST00000561266 TGP01266 2768 aa10.63□□□□□ -0.71
TPM1-230ENST00000561266 IGHV3-21A0A0B4J1V1 117 aa10.62□□□□□ -0.71
TPM1-230ENST00000561266 ST8SIA3O43173 380 aa10.62□□□□□ -0.71
TPM1-230ENST00000561266 SYNJ2BPP57105 145 aa10.62□□□□□ -0.71
TPM1-230ENST00000561266 C9orf66Q5T8R8 295 aa10.62□□□□□ -0.71
TPM1-230ENST00000561266 OR5B3Q8NH48 314 aa10.62□□□□□ -0.71
TPM1-230ENST00000561266 OR4A16Q8NH70 328 aa10.62□□□□□ -0.71
TPM1-230ENST00000561266 LSM10Q969L4 123 aaKnown RBP10.62□□□□□ -0.71
TPM1-230ENST00000561266 GALNT14Q96FL9 552 aa10.62□□□□□ -0.71
TPM1-230ENST00000561266 MCRIP2Q9BUT9 160 aaKnown RBP10.62□□□□□ -0.71
TPM1-230ENST00000561266 F11RQ9Y624 299 aaKnown RBP10.62□□□□□ -0.71
TPM1-230ENST00000561266 PLA2G10O15496 165 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 DEFA4P12838 97 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 IL7P13232 177 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 AKR1C2P52895 323 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 AP3S2P59780 193 aa10.61□□□□□ -0.71
TPM1-230ENST00000561266 HSPE1P61604 102 aaKnown RBP10.61□□□□□ -0.71
TPM1-230ENST00000561266 PRCDQ00LT1 54 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms