RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 TMEM56Q96MV1 263 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 DUX3Q96PT4 197 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 KLK9Q9UKQ9 250 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 ZNF257Q9Y2Q1 563 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
RPL28-209ENST00000560055 PLA2G10O15496 165 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 LGALS1P09382 135 aaKnown RBP13.03□□□□□ -0.32
RPL28-209ENST00000560055 AKR1C4P17516 323 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 PSMB6P28072 239 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 TMEM187Q14656 261 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 IZUMO4Q1ZYL8 232 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 THOC7Q6I9Y2 204 aaKnown RBP13.03□□□□□ -0.32
RPL28-209ENST00000560055 ZNF355PQ9NSJ1 428 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 FKBP11Q9NYL4 201 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 OR51B2Q9Y5P1 312 aa13.03□□□□□ -0.32
RPL28-209ENST00000560055 A0A0B4J293 547 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 A0A0G2JRQ6 117 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 LINC00854A0A1B0GVQ3 168 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 ATG12O94817 140 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 NDUFB6O95139 128 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 PRH1P02810 166 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 TRAPPC2P0DI81 140 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 TRAPPC2BP0DI82 140 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 AKR1C2P52895 323 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 DEFA6Q01524 100 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 TMEM128Q5BJH2 165 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 C19orf35Q6ZS72 473 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 TMED4Q7Z7H5 227 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 ZNF429Q86V71 674 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 SELENOHQ8IZQ5 122 aaKnown RBP13.02□□□□□ -0.33
RPL28-209ENST00000560055 OR10W1Q8NGF6 305 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 RBPMSQ93062 196 aaKnown RBP13.02□□□□□ -0.33
RPL28-209ENST00000560055 IL22RA2Q969J5 263 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 FANCD2OSQ96PS1 177 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 OR5B12Q96R08 314 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 ALX4Q9H161 411 aaPredicted RBP13.02□□□□□ -0.33
RPL28-209ENST00000560055 KCNIP3Q9Y2W7 256 aa13.02□□□□□ -0.33
RPL28-209ENST00000560055 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 CENPXA8MT69 81 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 IGHV3-11P01762 117 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 DEFA5Q01523 94 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 WT1-ASQ06250 92 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 HSD17B13Q7Z5P4 300 aaPredicted RBP13.01□□□□□ -0.33
RPL28-209ENST00000560055 FAM219AQ8IW50 185 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 OR11H1Q8NG94 326 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 OR4A16Q8NH70 328 aa13.01□□□□□ -0.33
RPL28-209ENST00000560055 WDR12Q9GZL7 423 aaKnown RBP13.01□□□□□ -0.33
RPL28-209ENST00000560055 FAM223BA6NKX1 122 aa13□□□□□ -0.33
RPL28-209ENST00000560055 REG1AP05451 166 aa13□□□□□ -0.33
RPL28-209ENST00000560055 RHOGP84095 191 aa13□□□□□ -0.33
RPL28-209ENST00000560055 AARDQ4LEZ3 155 aa13□□□□□ -0.33
RPL28-209ENST00000560055 TMEM268Q5VZI3 342 aa13□□□□□ -0.33
RPL28-209ENST00000560055 Q6ZRM9 215 aa13□□□□□ -0.33
RPL28-209ENST00000560055 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
RPL28-209ENST00000560055 NECAP1Q8NC96 275 aa13□□□□□ -0.33
RPL28-209ENST00000560055 LSM10Q969L4 123 aaKnown RBP13□□□□□ -0.33
RPL28-209ENST00000560055 RRNAD1Q96FB5 475 aaKnown RBP13□□□□□ -0.33
RPL28-209ENST00000560055 PRR13Q9NZ81 148 aa13□□□□□ -0.33
RPL28-209ENST00000560055 DMRT1Q9Y5R6 373 aa13□□□□□ -0.33
RPL28-209ENST00000560055 IGLV11-55A0A075B6I3 123 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 C13orf42A0A1B0GVH6 325 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 LYRM1O43325 122 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 CD33P20138 364 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 HSPE1P61604 102 aaKnown RBP12.99□□□□□ -0.33
RPL28-209ENST00000560055 PRCDQ00LT1 54 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 ZNF616Q08AN1 781 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 ZNF846Q147U1 533 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 ZNF343Q6P1L6 599 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 CENPSQ8N2Z9 138 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 OR1N2Q8NGR9 330 aa12.99□□□□□ -0.33
RPL28-209ENST00000560055 PRKDCP78527 4128 aaKnown RBP12.99□□□□□ -0.33
RPL28-209ENST00000560055 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 A0A087WW49 117 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 A0A0B4J2A0 478 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 ST8SIA3O43173 380 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 OR2J3O76001 311 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 DHFRP00374 187 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 OR13C7P0DN81 318 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 ANXA3P12429 323 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 UBE2MP61081 183 aaKnown RBP12.98□□□□□ -0.33
RPL28-209ENST00000560055 SRPXP78539 464 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 PPP1R1AQ13522 171 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 SLC35G3Q8N808 338 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 GPR146Q96CH1 333 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 HINT2Q9BX68 163 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 SHPKQ9UHJ6 478 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 FLVCR2Q9UPI3 526 aa12.98□□□□□ -0.33
RPL28-209ENST00000560055 LINC01619G3V211 115 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 UPK1BO75841 260 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 SFT2D2O95562 160 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 HSPB1P04792 205 aaKnown RBP12.97□□□□□ -0.33
RPL28-209ENST00000560055 OR8U8P0C7N1 319 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 HIST1H1BP16401 226 aaKnown RBP12.97□□□□□ -0.33
RPL28-209ENST00000560055 C15orf32Q32M92 178 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 ANKRD55Q3KP44 614 aa12.97□□□□□ -0.33
RPL28-209ENST00000560055 NMSQ5H8A3 153 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms