RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TOMM6Q96B49 74 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 MGLLQ99685 303 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 CHST6Q9GZX3 395 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 C11orf68Q9H3H3 251 aaKnown RBP2.07□□□□□ -2.08
SPG11-218ENST00000559754 SMDT1Q9H4I9 107 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 EFCAB1Q9HAE3 211 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 XAGE1AQ9HD64 81 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 TVP23BQ9NYZ1 205 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 SSR3Q9UNL2 185 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 ZNF443Q9Y2A4 671 aaPredicted RBP2.07□□□□□ -2.08
SPG11-218ENST00000559754 ZNF835Q9Y2P0 537 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 TIMM22Q9Y584 194 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 TRPM3Q9HCF6 1732 aaPredicted RBP2.07□□□□□ -2.08
SPG11-218ENST00000559754 ZNF106Q9H2Y7 1883 aaKnown RBP2.07□□□□□ -2.08
SPG11-218ENST00000559754 NUP160Q12769 1436 aa2.07□□□□□ -2.08
SPG11-218ENST00000559754 TRBV19A0A075B6N1 114 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 I3L521 148 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 ORC5O43913 435 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 PFDN1O60925 122 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 LY6HO94772 140 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 IFNA10P01566 189 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 G6PCP35575 357 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 SERPINB10P48595 397 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 RBM11P57052 281 aaKnown RBP2.06□□□□□ -2.08
SPG11-218ENST00000559754 RWDD2BP57060 319 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 KLF3P57682 345 aaPredicted RBP2.06□□□□□ -2.08
SPG11-218ENST00000559754 RPL30P62888 115 aaKnown RBP2.06□□□□□ -2.08
SPG11-218ENST00000559754 CCL20P78556 96 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 RPL22L1Q6P5R6 122 aaKnown RBP2.06□□□□□ -2.08
SPG11-218ENST00000559754 Q6Q795 121 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 SPINT4Q6UDR6 99 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 TOMM20LQ6UXN7 152 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 SPATA12Q7Z6I5 190 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 TMEM35BQ8NCS4 154 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 OR13C4Q8NGS5 318 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 C2orf50Q96LR7 162 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 IGF2BP2-AS1Q96M15 143 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 PBDC1Q9BVG4 233 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 RNF122Q9H9V4 155 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 HSPB11Q9Y547 144 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 LCTP09848 1927 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 KIF24Q5T7B8 1368 aa2.06□□□□□ -2.08
SPG11-218ENST00000559754 MYH11P35749 1972 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 TMEM269A0A1B0GVZ9 245 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 MAP1LC3B2A6NCE7 125 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 PRORSD1PA6NEY8 169 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 J3QRK9 145 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 IFNA7P01567 189 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 IGHV1-69P01742 117 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 SCGB1A1P11684 91 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 RPS4Y1P22090 263 aaKnown RBP2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H2BOP23527 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 S100GP29377 79 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 S100A7P31151 101 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H2BBP33778 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 CSN1S1P47710 185 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 ATP5G3P48201 142 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 FOXA1P55317 472 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H2BDP58876 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 TAS2R30P59541 319 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H2BCP62807 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 RBX1P62877 108 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST2H2BEQ16778 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 LGALSLQ3ZCW2 172 aaPredicted RBP2.05□□□□□ -2.08
SPG11-218ENST00000559754 SCGB2B2Q4G0G5 96 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.05□□□□□ -2.08
SPG11-218ENST00000559754 DCUN1D2Q6PH85 259 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 ZNF322Q6U7Q0 402 aaPredicted RBP2.05□□□□□ -2.08
SPG11-218ENST00000559754 CNEP1R1Q8N9A8 125 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 SLC25A40Q8TBP6 338 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H2BHQ93079 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 MALSU1Q96EH3 234 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 LYSMD1Q96S90 227 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 SERPINI1Q99574 410 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H2BNQ99877 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 HIST1H2BMQ99879 126 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 MAP1LC3BQ9GZQ8 125 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 PBOV1Q9GZY1 135 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 MED29Q9NX70 200 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 IL36BQ9NZH7 164 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 FUT9Q9Y231 359 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 CYSLTR1Q9Y271 337 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 FMN1Q68DA7 1419 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 SPATA31E1Q6ZUB1 1445 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 ADGBQ8N7X0 1667 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 MYH7BA7E2Y1 1941 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 PTPRSQ13332 1948 aa2.05□□□□□ -2.08
SPG11-218ENST00000559754 IGHV3-73A0A0B4J1V6 119 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 TRAV38-1A0A0B4J264 116 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 A0A1B0GU33 70 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 RPL36A-HNRNPH2H7BZ11 118 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 UBFD1O14562 309 aaKnown RBP2.04□□□□□ -2.08
SPG11-218ENST00000559754 NPYP01303 97 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 IGKV1-5P01602 117 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 C1QAP02745 245 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 PRM2P04554 102 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 LPAR6P43657 344 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 FXYD7P58549 80 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 AKR1C1Q04828 323 aa2.04□□□□□ -2.08
SPG11-218ENST00000559754 ECM29Q5VYK3 1845 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms