RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 HOXD3P31249 432 aaPredicted RBP14.41□□□□□ -0.1
CASC4-209ENST00000559222 AP3S2P59780 193 aa14.41□□□□□ -0.1
CASC4-209ENST00000559222 WT1-ASQ06250 92 aa14.41□□□□□ -0.1
CASC4-209ENST00000559222 TRIM16LQ309B1 348 aa14.41□□□□□ -0.1
CASC4-209ENST00000559222 KPRPQ5T749 579 aaPredicted RBP14.41□□□□□ -0.1
CASC4-209ENST00000559222 GLYATL2Q8WU03 294 aa14.41□□□□□ -0.1
CASC4-209ENST00000559222 HINT2Q9BX68 163 aa14.41□□□□□ -0.1
CASC4-209ENST00000559222 TMEM14BQ9NUH8 114 aa14.41□□□□□ -0.1
CASC4-209ENST00000559222 ZNF257Q9Y2Q1 563 aa14.41□□□□□ -0.1
CASC4-209ENST00000559222 C13orf42A0A1B0GVH6 325 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 NDUFB8O95169 186 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 CRYGCP07315 174 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 IL7P13232 177 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 FAUP35544 74 aaKnown RBP14.4□□□□□ -0.1
CASC4-209ENST00000559222 CCR6P51684 374 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 SUPT4H1P63272 117 aaKnown RBP14.4□□□□□ -0.1
CASC4-209ENST00000559222 SPINK9Q5DT21 86 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 TRIQKQ629K1 86 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 H2BFWTQ7Z2G1 175 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 CADM3Q8N126 398 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 DCUN1D4Q92564 292 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 DLX4Q92988 240 aaPredicted RBP14.4□□□□□ -0.1
CASC4-209ENST00000559222 RCC1LQ96I51 464 aaKnown RBP14.4□□□□□ -0.1
CASC4-209ENST00000559222 TMEM222Q9H0R3 208 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 NDUFA4L2Q9NRX3 87 aa14.4□□□□□ -0.1
CASC4-209ENST00000559222 LINC01619G3V211 115 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 SNAPC5O75971 98 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 IGHV3-23P01764 117 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 FGF2P09038 288 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 TRAPPC2P0DI81 140 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 TRAPPC2BP0DI82 140 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 AKR1C2P52895 323 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 MFAP2P55001 183 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 KRTAP10-11P60412 298 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 EXOSC2Q13868 293 aaKnown RBP14.39□□□□□ -0.11
CASC4-209ENST00000559222 ZNF343Q6P1L6 599 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 SELENOHQ8IZQ5 122 aaKnown RBP14.39□□□□□ -0.11
CASC4-209ENST00000559222 OR1L8Q8NGR8 309 aa14.39□□□□□ -0.11
CASC4-209ENST00000559222 IGLV11-55A0A075B6I3 123 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 A0A0B4J293 547 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 HSPB1P04792 205 aaKnown RBP14.38□□□□□ -0.11
CASC4-209ENST00000559222 OR8U8P0C7N1 319 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 OR13C7P0DN81 318 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 AKR1C4P17516 323 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 BTCP35070 178 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 TMEM187Q14656 261 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 Q6ZRM9 215 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 TMED4Q7Z7H5 227 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 SLC25A42Q86VD7 318 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 DPF1Q92782 380 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 FBXL7Q9UJT9 491 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 PRNDQ9UKY0 176 aa14.38□□□□□ -0.11
CASC4-209ENST00000559222 A0A0G2JLM5 398 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 MFSD2BA6NFX1 497 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 FAM223BA6NKX1 122 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 CDS2O95674 445 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 C15orf32Q32M92 178 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 FAM223AQ8IWN6 122 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 OR4A16Q8NH70 328 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 USMG5Q96IX5 58 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 TSC22D3Q99576 134 aa14.37□□□□□ -0.11
CASC4-209ENST00000559222 ATP5G2Q06055 141 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 KLK9Q2XQG4 91 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 TMEM268Q5VZI3 342 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 C11orf87Q6NUJ2 197 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 SGPP2Q8IWX5 399 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 NECAP1Q8NC96 275 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 LSM10Q969L4 123 aaKnown RBP14.36□□□□□ -0.11
CASC4-209ENST00000559222 CCDC140Q96MF4 163 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 KLK9Q9UKQ9 250 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 FLVCR2Q9UPI3 526 aa14.36□□□□□ -0.11
CASC4-209ENST00000559222 SEC14L6B5MCN3 397 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 PPP5D1E7EU14 171 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 BMPR1BO00238 502 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 PLA2G10O15496 165 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 ST8SIA3O43173 380 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 INPP1P49441 399 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 OR5B3Q8NH48 314 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 RBPMSQ93062 196 aaKnown RBP14.35□□□□□ -0.11
CASC4-209ENST00000559222 GPR146Q96CH1 333 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 GALNT14Q96FL9 552 aa14.35□□□□□ -0.11
CASC4-209ENST00000559222 SRSF8Q9BRL6 282 aaKnown RBP14.35□□□□□ -0.11
CASC4-209ENST00000559222 PEF1Q9UBV8 284 aaKnown RBP14.35□□□□□ -0.11
CASC4-209ENST00000559222 TGP01266 2768 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 PRKDCP78527 4128 aaKnown RBP14.34□□□□□ -0.11
CASC4-209ENST00000559222 IGHV3-21A0A0B4J1V1 117 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 OVOL1O14753 267 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 B3GALNT1O75752 331 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 HLA-AP01891 365 aaKnown RBP14.34□□□□□ -0.11
CASC4-209ENST00000559222 DEFA4P12838 97 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 MECP2P51608 486 aaKnown RBP14.34□□□□□ -0.11
CASC4-209ENST00000559222 PRCDQ00LT1 54 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 DHODHQ02127 395 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 SLC35G3Q8N808 338 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 RNASE11Q8TAA1 199 aaKnown RBP14.34□□□□□ -0.11
CASC4-209ENST00000559222 DEDD2Q8WXF8 326 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 TMEM56Q96MV1 263 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 SCGB3A2Q96PL1 93 aa14.34□□□□□ -0.11
CASC4-209ENST00000559222 AURKAIP1Q9NWT8 199 aaPredicted RBP14.34□□□□□ -0.11
CASC4-209ENST00000559222 PTTG2Q9NZH5 202 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms