RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 OR1L8Q8NGR8 309 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 QTRT1Q9BXR0 403 aaKnown RBP9.65□□□□□ -0.86
SLIRP-211ENST00000557623 SLC2A8Q9NY64 477 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 PRNDQ9UKY0 176 aa9.65□□□□□ -0.86
SLIRP-211ENST00000557623 A0A1B0GW64 132 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 SEC14L6B5MCN3 397 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 OVOL1O14753 267 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 CYB5BO43169 146 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 TRAPPC2P0DI81 140 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 TRAPPC2BP0DI82 140 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 CTRB1P17538 263 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 ZP3P21754 424 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 ZNF45Q02386 682 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 ATP5G2Q06055 141 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 ZNF79Q15937 498 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 PDLIM3Q53GG5 364 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-211ENST00000557623 CTRB2Q6GPI1 263 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 ZNF343Q6P1L6 599 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 TOMM5Q8N4H5 51 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 GDPD1Q8N9F7 314 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 OR51S1Q8NGJ8 323 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 OR6Q1Q8NGQ2 317 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 DEDD2Q8WXF8 326 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 DCUN1D4Q92564 292 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 SEC22AQ96IW7 307 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 AKIP1Q9NQ31 210 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 MCUBQ9NWR8 336 aa9.64□□□□□ -0.87
SLIRP-211ENST00000557623 TEX50A0A1B0GTY4 177 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 CGB1A6NKQ9 187 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 EIF4EBP3O60516 100 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-211ENST00000557623 PRH1P02810 166 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 DEFA4P12838 97 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 MYOD1P15172 320 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 AREGP15514 252 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 INSL3P51460 131 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 SLURP1P55000 103 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 EGFEM1PQ0D2K5 195 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 TRIM16LQ309B1 348 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 OR5B3Q8NH48 314 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 OR4A16Q8NH70 328 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 TRIM63Q969Q1 353 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 RTBDNQ9BSG5 229 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-211ENST00000557623 PEF1Q9UBV8 284 aaKnown RBP9.63□□□□□ -0.87
SLIRP-211ENST00000557623 GPR132Q9UNW8 380 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 OR51B2Q9Y5P1 312 aa9.63□□□□□ -0.87
SLIRP-211ENST00000557623 TEX13DA0A0J9YY54 714 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-211ENST00000557623 IGLC7A0M8Q6 106 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 ANKRD34BA5PLL1 514 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 C15orf61A6NNL5 157 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 OR2J3O76001 311 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 UCP1P25874 307 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 AKR1C2P52895 323 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 DHODHQ02127 395 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 EXOSC2Q13868 293 aaKnown RBP9.62□□□□□ -0.87
SLIRP-211ENST00000557623 KLF9Q13886 244 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-211ENST00000557623 KLK9Q2XQG4 91 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 DLX4Q92988 240 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-211ENST00000557623 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
SLIRP-211ENST00000557623 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
SLIRP-211ENST00000557623 C5orf66Q9H5L9 145 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 NAA60Q9H7X0 242 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 TMEM14BQ9NUH8 114 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 THYN1Q9P016 225 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 FBXL7Q9UJT9 491 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 KLK9Q9UKQ9 250 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 NSG2Q9Y328 171 aa9.62□□□□□ -0.87
SLIRP-211ENST00000557623 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 CRYM-AS1A6NIL9 109 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 RBMXL2O75526 392 aaKnown RBP9.61□□□□□ -0.87
SLIRP-211ENST00000557623 REG1AP05451 166 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 H2AFB1P0C5Y9 115 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 H2AFB2P0C5Z0 115 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 HOXD3P31249 432 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-211ENST00000557623 INPP1P49441 399 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 MECP2P51608 486 aaKnown RBP9.61□□□□□ -0.87
SLIRP-211ENST00000557623 DEFA5Q01523 94 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 TATDN3Q17R31 274 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 SP6Q3SY56 376 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 SGPP2Q8IWX5 399 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 RRNAD1Q96FB5 475 aaKnown RBP9.61□□□□□ -0.87
SLIRP-211ENST00000557623 FANCD2OSQ96PS1 177 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 ELOVL1Q9BW60 279 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 HINT2Q9BX68 163 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 SRRQ9GZT4 340 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 AURKAIP1Q9NWT8 199 aaPredicted RBP9.61□□□□□ -0.87
SLIRP-211ENST00000557623 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
SLIRP-211ENST00000557623 IGLV11-55A0A075B6I3 123 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.6□□□□□ -0.87
SLIRP-211ENST00000557623 CDS2O95674 445 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 PRB2P02812 416 aaPredicted RBP9.6□□□□□ -0.87
SLIRP-211ENST00000557623 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 OR13C7P0DN81 318 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms