RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ACBD7Q8N6N7 88 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 LFNGQ8NES3 379 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 OR13F1Q8NGS4 319 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 OR5AK2Q8NH90 309 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 CD300LFQ8TDQ1 290 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 RAB2BQ8WUD1 216 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 RGP1Q92546 391 aaPredicted RBP4.42□□□□□ -1.7
VPS33B-207ENST00000557470 TMEM106AQ96A25 262 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 PDCD10Q9BUL8 212 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 GABARAPL3Q9BY60 117 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 CCDC90BQ9GZT6 254 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 WFDC10AQ9H1F0 79 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 SAV1Q9H4B6 383 aaPredicted RBP4.42□□□□□ -1.7
VPS33B-207ENST00000557470 ISG20L2Q9H9L3 353 aaKnown RBP4.42□□□□□ -1.7
VPS33B-207ENST00000557470 TAF9BQ9HBM6 251 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 Q9N2K0 584 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 COA4Q9NYJ1 87 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 RCC2Q9P258 522 aaKnown RBP4.42□□□□□ -1.7
VPS33B-207ENST00000557470 PSORS1C1Q9UIG5 152 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 MCRIP1C9JLW8 97 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 NUPL2O15504 423 aaKnown RBP4.41□□□□□ -1.7
VPS33B-207ENST00000557470 SNAPC5O75971 98 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 FADS2O95864 444 aaKnown RBP4.41□□□□□ -1.7
VPS33B-207ENST00000557470 TRBV12-3P01733 135 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 FCER2P06734 321 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 GTF2F2P13984 249 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF93P35789 620 aaPredicted RBP4.41□□□□□ -1.7
VPS33B-207ENST00000557470 RPS19P39019 145 aaKnown RBP4.41□□□□□ -1.7
VPS33B-207ENST00000557470 AKR1D1P51857 326 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 CD81P60033 236 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 DEFA5Q01523 94 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 DDI2Q5TDH0 399 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 SSX9Q7RTT3 188 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 GAPTQ8N292 157 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 SYS1Q8N2H4 156 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 Q8N402 240 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 DEFB125Q8N687 156 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 OR4C5Q8NGB2 326 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 GPX8Q8TED1 209 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 LGALS12Q96DT0 336 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF503Q96F45 646 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 GRAMD2BQ96HH9 432 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF479Q96JC4 524 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 CNBD2Q96M20 576 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 CLCC1Q96S66 551 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 S100A13Q99584 98 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 ST6GALNAC5Q9BVH7 336 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 IFI27L2Q9H2X8 130 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 TMEM138Q9NPI0 162 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF355PQ9NSJ1 428 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 PAK1IP1Q9NWT1 392 aaPredicted RBP4.41□□□□□ -1.7
VPS33B-207ENST00000557470 IMPAD1Q9NX62 359 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 JPT1Q9UK76 154 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 TBC1D24Q9ULP9 559 aa4.41□□□□□ -1.7
VPS33B-207ENST00000557470 OR5H14A6NHG9 310 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 KRBOX1C9JBD0 128 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 H0YJW9 148 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 H3BUA1 57 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 H7C2Y5 167 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 ZNF780AO75290 641 aaPredicted RBP4.4□□□□□ -1.71
VPS33B-207ENST00000557470 SC5DO75845 299 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 SCGNO76038 276 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 CNIH1O95406 144 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 CA2P00918 260 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 MAS1P04201 325 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 CD7P09564 240 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 CT45A6P0DMU7 189 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 CT45A5P0DMU8 189 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 CT45A7P0DMV0 189 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 FCGR1AP12314 374 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 IL7P13232 177 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 FASP25445 335 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 AQP4P55087 323 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 PPP3R1P63098 170 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 PSG5Q15238 335 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 USF2Q15853 346 aaPredicted RBP4.4□□□□□ -1.71
VPS33B-207ENST00000557470 RNF212Q495C1 297 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 RPL39P5Q59GN2 51 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 SLC25A30Q5SVS4 291 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 ZNF562Q6V9R5 426 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 THAP8Q8NA92 274 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 OR2AK2Q8NG84 335 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 ZFAND1Q8TCF1 268 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 GPR148Q8TDV2 347 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 MRPS24Q96EL2 167 aaKnown RBP4.4□□□□□ -1.71
VPS33B-207ENST00000557470 MRPL48Q96GC5 212 aaKnown RBP4.4□□□□□ -1.71
VPS33B-207ENST00000557470 SIGLEC8Q9NYZ4 499 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 KCNIP1Q9NZI2 227 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 METTL1Q9UBP6 276 aaKnown RBP4.4□□□□□ -1.71
VPS33B-207ENST00000557470 EXOGQ9Y2C4 368 aaKnown RBP4.4□□□□□ -1.71
VPS33B-207ENST00000557470 PEX16Q9Y5Y5 336 aa4.4□□□□□ -1.71
VPS33B-207ENST00000557470 TRAV18A0A075B6X5 111 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 TRBV5-7A0A0A0MS05 114 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 A0A0G2JLM5 398 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 A0A1W2PPV4 95 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 NUPR2A6NF83 97 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 OR11H12B2RN74 326 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 H3BMQ9 156 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 RGS5O15539 181 aa4.39□□□□□ -1.71
VPS33B-207ENST00000557470 YPEL1O60688 119 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms