RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 NPSP0C0P6 89 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 NPY1RP25929 384 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 COMPP49747 757 aaPredicted RBP9.37□□□□□ -0.91
SRP54-213ENST00000556994 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
SRP54-213ENST00000556994 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 FAM201AQ5SY85 155 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 IER2Q9BTL4 223 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 NAT8BQ9UHF3 227 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 TRGV10A0A0A0MS01 117 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 HELTA6NFD8 242 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 FAM90A9PA6NNJ1 464 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 OR10J4P0C629 311 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 TNFSF10P50591 281 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 TMEM183BQ1AE95 376 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 OR4A47Q6IF82 309 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 JPT1Q9UK76 154 aa9.37□□□□□ -0.91
SRP54-213ENST00000556994 TECTAO75443 2155 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 LAMA5O15230 3695 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 C15orf61A6NNL5 157 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 ESDP10768 282 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 TFPI2P48307 235 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 GNG4P50150 75 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 MLANAQ16655 118 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 SIGLECL1Q8N7X8 197 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 RCHY1Q96PM5 261 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 C20orf144Q9BQM9 153 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 INTS1Q8N201 2190 aaKnown RBP9.36□□□□□ -0.91
SRP54-213ENST00000556994 C9JCJ5 164 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 MT-CO2P00403 227 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 LINC00869P0C866 280 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 PMCHP20382 165 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 KIR2DL2P43627 348 aaPredicted RBP9.36□□□□□ -0.91
SRP54-213ENST00000556994 MSMPQ1L6U9 139 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 C11orf52Q96A22 123 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 FER1L6-AS2Q96M78 137 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 GCM1Q9NP62 436 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 ENY2Q9NPA8 101 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 CLCF1Q9UBD9 225 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 COLQQ9Y215 455 aaPredicted RBP9.36□□□□□ -0.91
SRP54-213ENST00000556994 PPIAL4AQ9Y536 164 aa9.36□□□□□ -0.91
SRP54-213ENST00000556994 PCNX2A6NKB5 2137 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 DLEU1O43261 78 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 OR7C2O60412 319 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 GPX1P07203 203 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 BRS3P32247 399 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 HSPE1P61604 102 aaKnown RBP9.35□□□□□ -0.91
SRP54-213ENST00000556994 PRR20EP86478 221 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 PRR20CP86479 221 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 PRR20DP86480 221 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 PRR20BP86481 221 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 PRR20AP86496 221 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 RAB31Q13636 194 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 CT45A1Q5HYN5 189 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 MRPL54Q6P161 138 aaKnown RBP9.35□□□□□ -0.91
SRP54-213ENST00000556994 DUX4L9Q6RFH8 374 aaPredicted RBP9.35□□□□□ -0.91
SRP54-213ENST00000556994 DHRS13Q6UX07 377 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 GCSAMQ8N6F7 178 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 C9orf106Q8NAJ2 232 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 NHLRC2Q8NBF2 726 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 CT45A3Q8NHU0 189 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 DDB2Q92466 427 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 NABP2Q9BQ15 211 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 CALYQ9NYX4 217 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 TBL2Q9Y4P3 447 aaKnown RBP9.35□□□□□ -0.91
SRP54-213ENST00000556994 YLPM1P49750 1951 aaKnown RBP9.35□□□□□ -0.91
SRP54-213ENST00000556994 ARFGEF3Q5TH69 2177 aa9.35□□□□□ -0.91
SRP54-213ENST00000556994 IGKV1OR2-108A0A075B7D4 117 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 IGHV2OR16-5A0A0B4J2B6 119 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 TRGV8A0A0C4DH27 118 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 A0A1B0GWJ7 208 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 LNP1A1A4G5 178 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 M0QZK8 103 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 MGST3O14880 152 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 CA1P00915 261 aaPredicted RBP9.34□□□□□ -0.91
SRP54-213ENST00000556994 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
SRP54-213ENST00000556994 MGST1P10620 155 aaKnown RBP9.34□□□□□ -0.91
SRP54-213ENST00000556994 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
SRP54-213ENST00000556994 Q0VG73 95 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 OR4S2Q8NH73 311 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 ZNF503Q96F45 646 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 GNB1LQ9BYB4 327 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 CHODLQ9H9P2 273 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 SERTAD4Q9NUC0 356 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 GOLT1BQ9Y3E0 138 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 DSCAMO60469 2012 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 IGHV1-18A0A0C4DH31 117 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 AMTP48728 403 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 GNG10P50151 68 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 MOGAT3Q86VF5 341 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 LYG1Q8N1E2 194 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 SFXN3Q9BWM7 321 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 LPAR2Q9HBW0 351 aa9.34□□□□□ -0.91
SRP54-213ENST00000556994 NRN1Q9NPD7 142 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms