RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NUMA1Q14980 2115 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 IGHV3-64A0A075B6Q5 118 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 IGKV1D-43A0A0B4J1Z2 117 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 IGHV1-18A0A0C4DH31 117 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 A0A0D9SEW6 157 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 A0A1B0GW54 56 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 HMSDA8MTL9 139 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 FAAHO00519 579 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 KRT75O95678 551 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 S100A6P06703 90 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 CD79AP11912 226 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 PSMB8P28062 276 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 RPL5P46777 297 aaKnown RBP1.21□□□□□ -2.22
SCFD1-213ENST00000554776 OMPP47874 163 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 SNRPD2P62316 118 aaKnown RBP1.21□□□□□ -2.22
SCFD1-213ENST00000554776 RUNX1Q01196 453 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 GLO1Q04760 184 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 ACOT6Q3I5F7 207 aaPredicted RBP1.21□□□□□ -2.22
SCFD1-213ENST00000554776 FAM27BQ5VT28 67 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 Q6ZS49 121 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 ANKRD29Q8N6D5 301 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 OR8B12Q8NGG6 310 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 UCK1Q9HA47 277 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 VPS29Q9UBQ0 182 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 RGS12O14924 1447 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 MTUS2Q5JR59 1369 aa1.21□□□□□ -2.22
SCFD1-213ENST00000554776 DOCK10Q96BY6 2186 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 FAM236DA0A1B0GTK5 79 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 A0A1B0GV50 99 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 TMEM114B3SHH9 223 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 J3QKU1 62 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 ZNF737O75373 536 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 HLA-DRB1P01911 266 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 SULT1A3P0DMM9 295 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 SULT1A4P0DMN0 295 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 FAM236CP0DP71 79 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H1TP22492 207 aaPredicted RBP1.2□□□□□ -2.22
SCFD1-213ENST00000554776 POLR2GP62487 172 aaKnown RBP eCLIP1.2□□□□□ -2.22
SCFD1-213ENST00000554776 KISS1Q15726 138 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 C9orf64Q5T6V5 341 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 Q6ZRN7 208 aaPredicted RBP1.2□□□□□ -2.22
SCFD1-213ENST00000554776 SLC36A1Q7Z2H8 476 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 ULBP3Q9BZM4 244 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 C11orf68Q9H3H3 251 aaKnown RBP1.2□□□□□ -2.22
SCFD1-213ENST00000554776 XAGE1AQ9HD64 81 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.2□□□□□ -2.22
SCFD1-213ENST00000554776 HEATR5AQ86XA9 2040 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 KIF24Q5T7B8 1368 aa1.2□□□□□ -2.22
SCFD1-213ENST00000554776 SORL1Q92673 2214 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 A0A087WUJ7 227 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 OR4C46A6NHA9 309 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 GOLGA6L19H0YKK7 550 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 KPNA3O00505 521 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-213ENST00000554776 ORC5O43913 435 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 NOS1APO75052 506 aaPredicted RBP1.19□□□□□ -2.22
SCFD1-213ENST00000554776 CNIH1O95406 144 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 IGKV1-5P01602 117 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 IGHV3-7P01780 117 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 C1QCP02747 245 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 PRM2P04554 102 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 TRGC1P0CF51 173 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 RPS4Y1P22090 263 aaKnown RBP1.19□□□□□ -2.22
SCFD1-213ENST00000554776 PSME3P61289 254 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 SUPT4H1P63272 117 aaKnown RBP1.19□□□□□ -2.22
SCFD1-213ENST00000554776 HBA1P69905 142 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 RELAQ04206 551 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 RPL18Q07020 188 aaKnown RBP1.19□□□□□ -2.22
SCFD1-213ENST00000554776 RGS21Q2M5E4 152 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 AADACL3Q5VUY0 350 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 SPOPLQ6IQ16 392 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 BPIFA4PQ86YQ2 179 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 C20orf196Q8IYI0 205 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 RPP25LQ8N5L8 163 aaKnown RBP1.19□□□□□ -2.22
SCFD1-213ENST00000554776 MRPL30Q8TCC3 161 aaKnown RBP1.19□□□□□ -2.22
SCFD1-213ENST00000554776 DCUN1D1Q96GG9 259 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 DOHHQ9BU89 302 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 DOCK5Q9H7D0 1870 aa1.19□□□□□ -2.22
SCFD1-213ENST00000554776 SMIM9A6NGZ8 99 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 FABP5P3A8MUU1 101 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 SLC22A1O15245 554 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 NAPSAO96009 420 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 SERPINA7P05543 415 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 MSMBP08118 114 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H2BOP23527 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H2BBP33778 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 EMP1P54849 157 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H2BDP58876 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 DEFA3P59666 94 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H2BCP62807 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 STX5Q13190 355 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST2H2BEQ16778 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-213ENST00000554776 TMEM42Q69YG0 159 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 LPCAT3Q6P1A2 487 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 FAM173BQ6P4H8 233 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 COA5Q86WW8 74 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 LRRC25Q8N386 305 aaPredicted RBP1.18□□□□□ -2.22
SCFD1-213ENST00000554776 SLC7A6Q92536 515 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 HIST1H2BHQ93079 126 aa1.18□□□□□ -2.22
SCFD1-213ENST00000554776 DGCR14Q96DF8 476 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms