RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 RHOGP84095 191 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 CTRB2Q6GPI1 263 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 SLC25A42Q86VD7 318 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 C1QL4Q86Z23 238 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 OR1L8Q8NGR8 309 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 OR1N2Q8NGR9 330 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 TSC22D3Q99576 134 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 SLC25A21Q9BQT8 299 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-226ENST00000553011 NDUFA4L2Q9NRX3 87 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 TMEM14BQ9NUH8 114 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 PRR13Q9NZ81 148 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 PRNDQ9UKY0 176 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 ZNF257Q9Y2Q1 563 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 MEGF8Q7Z7M0 2845 aa10.92□□□□□ -0.66
PTCH1-226ENST00000553011 IGHV4OR15-8A0A075B7B6 117 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 A0A087WW49 117 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 TRBV9A0A0B4J1U6 114 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 A0A0G2JRQ6 117 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 NAP1L6A6NFF2 107 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 G3V4G9 280 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 OR2J3O76001 311 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 ATG12O94817 140 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 CRYGCP07315 174 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 BTCP35070 178 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 DHODHQ02127 395 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 WT1-ASQ06250 92 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 FHL3Q13643 280 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 TMEM187Q14656 261 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 OXLD1Q5BKU9 147 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 SELENOHQ8IZQ5 122 aaKnown RBP10.91□□□□□ -0.66
PTCH1-226ENST00000553011 OR4A16Q8NH70 328 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 GALNT14Q96FL9 552 aa10.91□□□□□ -0.66
PTCH1-226ENST00000553011 A0A0B4J293 547 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 A0A0G2JLM5 398 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 PLA2G10O15496 165 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 OR13C7P0DN81 318 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 IGLL1P15814 213 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 ZNF616Q08AN1 781 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 RBMS2Q15434 407 aaKnown RBP10.9□□□□□ -0.66
PTCH1-226ENST00000553011 TMEM268Q5VZI3 342 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.66
PTCH1-226ENST00000553011 OR5B3Q8NH48 314 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 RNASE11Q8TAA1 199 aaKnown RBP10.9□□□□□ -0.66
PTCH1-226ENST00000553011 S100ZQ8WXG8 99 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 DPF1Q92782 380 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 RBPMSQ93062 196 aaKnown RBP10.9□□□□□ -0.66
PTCH1-226ENST00000553011 RRNAD1Q96FB5 475 aaKnown RBP10.9□□□□□ -0.66
PTCH1-226ENST00000553011 USMG5Q96IX5 58 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 FANCD2OSQ96PS1 177 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 C7orf50Q9BRJ6 194 aaKnown RBP10.9□□□□□ -0.66
PTCH1-226ENST00000553011 SRSF8Q9BRL6 282 aaKnown RBP10.9□□□□□ -0.66
PTCH1-226ENST00000553011 FKBP11Q9NYL4 201 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 KCNIP3Q9Y2W7 256 aa10.9□□□□□ -0.66
PTCH1-226ENST00000553011 SORL1Q92673 2214 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 ANKRD34BA5PLL1 514 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 CENPXA8MT69 81 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 NDUFB6O95139 128 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 OR8U8P0C7N1 319 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 SLURP1P55000 103 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 Q6ZRM9 215 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 NECAP1Q8NC96 275 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 LSM10Q969L4 123 aaKnown RBP10.89□□□□□ -0.67
PTCH1-226ENST00000553011 TMEM56Q96MV1 263 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 CCDC32Q9BV29 185 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 FBXL7Q9UJT9 491 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 FLVCR2Q9UPI3 526 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 TMEM56-RWDD3S4R434 201 aa10.89□□□□□ -0.67
PTCH1-226ENST00000553011 IGLV11-55A0A075B6I3 123 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 FAM223BA6NKX1 122 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 LINC01619G3V211 115 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 ST8SIA3O43173 380 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 LYRM1O43325 122 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 NDUFB8O95169 186 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 DHFRP00374 187 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 TRBV12-3P01733 135 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 HSPB1P04792 205 aaKnown RBP10.88□□□□□ -0.67
PTCH1-226ENST00000553011 DEFA4P12838 97 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 VAMP1P23763 118 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 MECP2P51608 486 aaKnown RBP10.88□□□□□ -0.67
PTCH1-226ENST00000553011 HSPE1P61604 102 aaKnown RBP10.88□□□□□ -0.67
PTCH1-226ENST00000553011 ATP5G2Q06055 141 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 EXOSC2Q13868 293 aaKnown RBP10.88□□□□□ -0.67
PTCH1-226ENST00000553011 C15orf32Q32M92 178 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 TMEM128Q5BJH2 165 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 SPINK9Q5DT21 86 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 ZNF343Q6P1L6 599 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 ZNF429Q86V71 674 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 FAM223AQ8IWN6 122 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 CENPSQ8N2Z9 138 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 GPR146Q96CH1 333 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 RCC1LQ96I51 464 aaKnown RBP10.88□□□□□ -0.67
PTCH1-226ENST00000553011 DMRT1Q9Y5R6 373 aa10.88□□□□□ -0.67
PTCH1-226ENST00000553011 ANXA3P12429 323 aa10.87□□□□□ -0.67
PTCH1-226ENST00000553011 HIST1H1BP16401 226 aaKnown RBP10.87□□□□□ -0.67
PTCH1-226ENST00000553011 PRCDQ00LT1 54 aa10.87□□□□□ -0.67
PTCH1-226ENST00000553011 PPP1R1AQ13522 171 aa10.87□□□□□ -0.67
PTCH1-226ENST00000553011 ZNF846Q147U1 533 aa10.87□□□□□ -0.67
PTCH1-226ENST00000553011 KLK9Q2XQG4 91 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms