RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 STAG3L2P0CL84 134 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 STAG3L3P0CL85 134 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 AREGP15514 252 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 NPPCP23582 126 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 DDTP30046 118 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 SSTR5P35346 364 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 THBS3P49746 956 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 FABP6P51161 128 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 CASP6P55212 293 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 GNB1P62873 340 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 RPL19P84098 196 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 PMP22Q01453 160 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 GAMTQ14353 236 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 PDZD11Q5EBL8 140 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 C9orf152Q5JTZ5 239 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 PRAMEF5Q5TYX0 476 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 PRAMEF6Q5VXH4 476 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 DHRS13Q6UX07 377 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 BTNL3Q6UXE8 466 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 TMEM144Q7Z5S9 345 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 LINC01551Q86U37 167 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 MED12LQ86YW9 2145 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 GCSAMQ8N6F7 178 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 Q8N7P7 452 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 CNEP1R1Q8N9A8 125 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 BEND2Q8NDZ0 799 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 OR4S2Q8NH73 311 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 GATAD1Q8WUU5 269 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 LRRC29Q8WV35 223 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 RNF125Q96EQ8 232 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 ZNF503Q96F45 646 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 C14orf144Q96I85 54 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 GNG12Q9UBI6 72 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 PROCRQ9UNN8 238 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 ARL2-SNX15V9GYD0 113 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 DNAJC13O75165 2243 aa4.92□□□□□ -1.62
CHMP4A-210ENST00000552620 KIAA2026Q5HYC2 2103 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 SPTBN5Q9NRC6 3674 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 A0A087X0M5 115 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 IGHV3-43A0A0B4J1X8 118 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 IGHV2OR16-5A0A0B4J2B6 119 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 IGHV1-18A0A0C4DH31 117 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 A0A0U1RQK1 487 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 MDFIC2A0A1B0GVS7 189 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 A0A1B0GX30 115 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 A0A1W2PPQ1 181 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 ZNF320A2RRD8 509 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 PRSS46E5RG02 174 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 M0R296 226 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 PROP1O75360 226 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 NDUFB4O95168 129 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 IGHV3-13P01766 116 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 CGB3P0DN86 165 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 CGB7P0DN87 165 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 IGHV3-43DP0DP04 118 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 GZMBP10144 247 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 RPL29P47914 159 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 CNN1P51911 297 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 EDDM3BP56851 147 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 YPEL3P61236 119 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 HSPE1P61604 102 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 RHOBP62745 196 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 CFHR3Q02985 330 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 TRIP6Q15654 476 aaKnown RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 POU2AF1Q16633 256 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 IQCJQ1A5X6 159 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 CST9LP1Q5W188 147 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 FAM53AQ6NSI3 398 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 ZNF600Q6ZNG1 722 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 BHLHA15Q7RTS1 189 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 VASH2Q86V25 355 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 C9orf106Q8NAJ2 232 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 NECAP1Q8NC96 275 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 OR10G8Q8NGN5 311 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 RFESDQ8TAC1 157 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 TMEM37Q8WXS4 190 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 DDB2Q92466 427 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 UHRF2Q96PU4 802 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 C19orf24Q9BVV8 132 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 ELOVL1Q9BW60 279 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 GGTLC1Q9BX51 225 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 OPN3Q9H1Y3 402 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 ENY2Q9NPA8 101 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 ZNF71Q9NQZ8 489 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 SLC25A10Q9UBX3 287 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 FOXA2Q9Y261 457 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 TRAPPC1Q9Y5R8 145 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 PXMP4Q9Y6I8 212 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 R4GN57 208 aa4.91□□□□□ -1.62
CHMP4A-210ENST00000552620 IGKV1D-17A0A075B6S4 117 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 TRGV10A0A0A0MS01 117 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 IGHV3-64DA0A0J9YX35 117 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 KBTBD11-OT1A0A1B0GTJ5 212 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 A8MXE2 369 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 DEFB108AA8MXU0 73 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 C9JCJ5 164 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 RRHO14718 337 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 CGAP01215 116 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 LHBP01229 141 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 IL3RAP26951 378 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms