RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	NEIL1	Q96FI4	390 aa	Predicted RBP	11.37	□□□□□ -0.59
RAB3IP-216	ENST00000552199	NDUFA4L2	Q9NRX3	87 aa		11.37	□□□□□ -0.59
RAB3IP-216	ENST00000552199	PXMP4	Q9Y6I8	212 aa		11.37	□□□□□ -0.59
RAB3IP-216	ENST00000552199	NDUFS6	O75380	124 aa	Known RBP	11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	DEFA4	P12838	97 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	MC5R	P33032	325 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RAB13	P51153	203 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RPL8	P62917	257 aa	Known RBP	11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	TMEM249	Q2WGJ8	235 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	BSX	Q3C1V8	233 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	C2orf83	Q53S99	150 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	MIC13	Q5XKP0	118 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	OR1L8	Q8NGR8	309 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	VSTM2A	Q8TAG5	236 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RAB1C	Q92928	201 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	COMMD5	Q9GZQ3	224 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	KCNIP2	Q9NS61	270 aa		11.36	□□□□□ -0.59
RAB3IP-216	ENST00000552199	IGHV2-26	A0A0B4J1V2	119 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	PPIAL4C	A0A0B4J2A2	164 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199		A0A1W2PPV4	95 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	OR2C1	O95371	312 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	IGLV2-23	P01705	113 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	PPIAL4G	P0DN37	164 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	PRRX1	P54821	245 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RNF212	Q495C1	297 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	OR8B3	Q8NGG8	313 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	C8orf46	Q8TAG6	207 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	GATAD1	Q8WUU5	269 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	OR8B2	Q96RD0	313 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	PATZ1	Q9HBE1	687 aa	Known RBP	11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	MIOX	Q9UGB7	285 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	INS-IGF2	F8WCM5	200 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RBP4	P02753	201 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RNASE2	P10153	161 aa	Known RBP	11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	MAS1L	P35410	378 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RAB31	Q13636	194 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	WDR25	Q64LD2	544 aa	Predicted RBP	11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	OR10W1	Q8NGF6	305 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	YPEL4	Q96NS1	127 aa		11.35	□□□□□ -0.59
RAB3IP-216	ENST00000552199	NBAS	A2RRP1	2371 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	ABCA4	P78363	2273 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	ZNF727	A8MUV8	499 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199		B4DEV8	164 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	TMEM250	H0YL14	139 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	LY6H	O94772	140 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	IGLV1-47	P01700	117 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	CTRB1	P17538	263 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	RPL29	P47914	159 aa	Known RBP	11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	PNRC1	Q12796	327 aa	Predicted RBP	11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	HLA-DRB5	Q30154	266 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	CTRB2	Q6GPI1	263 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	IQCF2	Q8IXL9	164 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	FAM24B	Q8N5W8	94 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	SSMEM1	Q8WWF3	244 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	NEU4	Q8WWR8	484 aa	Predicted RBP	11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	FAM122A	Q96E09	287 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	SDF2L1	Q9HCN8	221 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	MALRD1	Q5VYJ5	2156 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	COL6A6	A6NMZ7	2263 aa		11.34	□□□□□ -0.59
RAB3IP-216	ENST00000552199	PAGE4	O60829	102 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	SOD3	P08294	240 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	LGALS7	P47929	136 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	DLX1	P56177	255 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	B2M	P61769	119 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	ERH	P84090	104 aa	Known RBP	11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	VMA21	Q3ZAQ7	101 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	CLEC7A	Q9BXN2	247 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	SIRT7	Q9NRC8	400 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199		A0A1W2PN81	502 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199		E7EUB6	86 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	ENSA	O43768	121 aa	Known RBP	11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	IGFBP2	P18065	325 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	CHRNA7	P36544	502 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	TMEM144	Q7Z5S9	345 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	STPG3	Q8N7X2	389 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	LY6G5B	Q8NDX9	201 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	BEND2	Q8NDZ0	799 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	RITA1	Q96K30	269 aa		11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.33	□□□□□ -0.6
RAB3IP-216	ENST00000552199	CGB1	A6NKQ9	187 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	BUB1B-PAK6	H3BSN5	160 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	RAB5A	P20339	215 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	PRR20E	P86478	221 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	PRR20C	P86479	221 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	PRR20D	P86480	221 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	PRR20B	P86481	221 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	PRR20A	P86496	221 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	OR4F5	Q8NH21	305 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	TIMD4	Q96H15	378 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	OR4F4	Q96R69	305 aa		11.32	□□□□□ -0.6
RAB3IP-216	ENST00000552199	IGHV3-72	A0A0B4J1Y9	119 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199	hCG_1809904	A0A1W2PP81	198 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199		A0A1W2PR64	198 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199		A0A1W2PRV1	198 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199	CXorf65	A6NEN9	183 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199	C1orf196	B1AJZ1	125 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199	SLC25A17	O43808	307 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199	LIPF	P07098	398 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199	LINC00869	P0C866	280 aa		11.31	□□□□□ -0.6
RAB3IP-216	ENST00000552199	STAG3L2	P0CL84	134 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms