RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, human

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK4-210	ENST00000551888	CD40LG	P29965	261 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	AKR1C2	P52895	323 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	WT1-AS	Q06250	92 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	TMEM187	Q14656	261 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	CTRB2	Q6GPI1	263 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	SGPP2	Q8IWX5	399 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	SELENOH	Q8IZQ5	122 aa	Known RBP	13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	WFDC9	Q8NEX5	89 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	OR11H1	Q8NG94	326 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	NDUFA4L2	Q9NRX3	87 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	PRND	Q9UKY0	176 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	ZNF257	Q9Y2Q1	563 aa		13.58	□□□□□ -0.24
CDK4-210	ENST00000551888	IGHV4OR15-8	A0A075B7B6	117 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888		A0A087WW49	117 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888		A0A0B4J293	547 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	RHOG	P84095	191 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	RBMS2	Q15434	407 aa	Known RBP	13.57	□□□□□ -0.24
CDK4-210	ENST00000551888		Q6ZRM9	215 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	OR1L8	Q8NGR8	309 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	S100Z	Q8WXG8	99 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	TMEM56	Q96MV1	263 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	FANCD2OS	Q96PS1	177 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	TSC22D3	Q99576	134 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	CCDC32	Q9BV29	185 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	DMRT1	Q9Y5R6	373 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888	TMEM56-RWDD3	S4R434	201 aa		13.57	□□□□□ -0.24
CDK4-210	ENST00000551888		G3V4G9	280 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	OR2J3	O76001	311 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	NDUFB6	O95139	128 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	TRAPPC2	P0DI81	140 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	TRAPPC2B	P0DI82	140 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	DHODH	Q02127	395 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	TMEM268	Q5VZI3	342 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	C1QL4	Q86Z23	238 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	OR1N2	Q8NGR9	330 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	OR5B3	Q8NH48	314 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	OR4A16	Q8NH70	328 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	RBPMS	Q93062	196 aa	Known RBP	13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	C7orf50	Q9BRJ6	194 aa	Known RBP	13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	HINT2	Q9BX68	163 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	FLVCR2	Q9UPI3	526 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	MEGF8	Q7Z7M0	2845 aa		13.56	□□□□□ -0.24
CDK4-210	ENST00000551888	CD33	P20138	364 aa		13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	PPP1R1A	Q13522	171 aa		13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	KLK9	Q2XQG4	91 aa		13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	OXLD1	Q5BKU9	147 aa		13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	SAMD5	Q5TGI4	173 aa		13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	THOC7	Q6I9Y2	204 aa	Known RBP	13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	SLC25A42	Q86VD7	318 aa		13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	SRSF8	Q9BRL6	282 aa	Known RBP	13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	KLK9	Q9UKQ9	250 aa		13.55	□□□□□ -0.24
CDK4-210	ENST00000551888	IGLV11-55	A0A075B6I3	123 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	C13orf42	A0A1B0GVH6	325 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	LYRM1	O43325	122 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	TRBV12-3	P01733	135 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	OR13C7	P0DN81	318 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	IGLL1	P15814	213 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	SLURP1	P55000	103 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	MFAP2	P55001	183 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	RAB25	P57735	213 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	PRCD	Q00LT1	54 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	ZNF616	Q08AN1	781 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	TMEM128	Q5BJH2	165 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	SPINK9	Q5DT21	86 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	ZNF429	Q86V71	674 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	CENPS	Q8N2Z9	138 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	SLC35G3	Q8N808	338 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	LSM10	Q969L4	123 aa	Known RBP	13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	GPR146	Q96CH1	333 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	WDR12	Q9GZL7	423 aa	Known RBP	13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	FKBP11	Q9NYL4	201 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	TBC1D24	Q9ULP9	559 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888	KCNIP3	Q9Y2W7	256 aa		13.54	□□□□□ -0.24
CDK4-210	ENST00000551888		A0A0G2JLM5	398 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	FAM223B	A6NKX1	122 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	CENPX	A8MT69	81 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	ST8SIA3	O43173	380 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	ATG12	O94817	140 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	NDUFB8	O95169	186 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	IFITM3	Q01628	133 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	ZNF846	Q147U1	533 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	C15orf32	Q32M92	178 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	ANKRD55	Q3KP44	614 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	ZNF343	Q6P1L6	599 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	FAM223A	Q8IWN6	122 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	NECAP1	Q8NC96	275 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	RNASE11	Q8TAA1	199 aa	Known RBP	13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	IL22RA2	Q969J5	263 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	RRNAD1	Q96FB5	475 aa	Known RBP	13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	USMG5	Q96IX5	58 aa		13.53	□□□□□ -0.24
CDK4-210	ENST00000551888	ANKRD34B	A5PLL1	514 aa		13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	SFT2D2	O95562	160 aa		13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	OR8U8	P0C7N1	319 aa		13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	VAMP1	P23763	118 aa		13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	HSPE1	P61604	102 aa	Known RBP	13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	EXOSC2	Q13868	293 aa	Known RBP	13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	LYZL2	Q7Z4W2	148 aa		13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	FAM219A	Q8IW50	185 aa		13.52	□□□□□ -0.25
CDK4-210	ENST00000551888	CACNG5	Q9UF02	275 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms