RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 FAM223AQ8IWN6 122 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 OR5B3Q8NH48 314 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 OR4A16Q8NH70 328 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 DPF1Q92782 380 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 RCC1LQ96I51 464 aaKnown RBP13.42□□□□□ -0.26
CDK4-208ENST00000551706 DUX3Q96PT4 197 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 OR5B12Q96R08 314 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 MCRIP2Q9BUT9 160 aaKnown RBP13.42□□□□□ -0.26
CDK4-208ENST00000551706 TMEM222Q9H0R3 208 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 TMEM14BQ9NUH8 114 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 OR51B2Q9Y5P1 312 aa13.42□□□□□ -0.26
CDK4-208ENST00000551706 TEX50A0A1B0GTY4 177 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 A0A1B0GW64 132 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 C15orf61A6NNL5 157 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 CENPXA8MT69 81 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 OR5AC1P0C628 307 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 MYOD1P15172 320 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 PSMB6P28072 239 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 S100ZQ8WXG8 99 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 RRNAD1Q96FB5 475 aaKnown RBP13.41□□□□□ -0.26
CDK4-208ENST00000551706 GALNT14Q96FL9 552 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 SDHCQ99643 169 aaPredicted RBP13.41□□□□□ -0.26
CDK4-208ENST00000551706 C7orf50Q9BRJ6 194 aaKnown RBP13.41□□□□□ -0.26
CDK4-208ENST00000551706 GPR61Q9BZJ8 451 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 NSG2Q9Y328 171 aa13.41□□□□□ -0.26
CDK4-208ENST00000551706 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 CGB1A6NKQ9 187 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 CYB5BO43169 146 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 CDS2O95674 445 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 IGHV3-11P01762 117 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 HSPB1P04792 205 aaKnown RBP13.4□□□□□ -0.26
CDK4-208ENST00000551706 DEFA4P12838 97 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 IL7P13232 177 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 AREGP15514 252 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 CTRB1P17538 263 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 RAB25P57735 213 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 RHOGP84095 191 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 CTRB2Q6GPI1 263 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 NECAP1Q8NC96 275 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
CDK4-208ENST00000551706 GLYATL2Q8WU03 294 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 TMEM56Q96MV1 263 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 AKIP1Q9NQ31 210 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 NDUFA4L2Q9NRX3 87 aa13.4□□□□□ -0.26
CDK4-208ENST00000551706 COL7A1Q02388 2944 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 PIGBOS1A0A0B4J2F0 54 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 IGLC7A0M8Q6 106 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 LINC01619G3V211 115 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 RBMXL2O75526 392 aaKnown RBP13.39□□□□□ -0.27
CDK4-208ENST00000551706 IGKV1-5P01602 117 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 ANXA3P12429 323 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 HIST1H1BP16401 226 aaKnown RBP13.39□□□□□ -0.27
CDK4-208ENST00000551706 RBMS2Q15434 407 aaKnown RBP13.39□□□□□ -0.27
CDK4-208ENST00000551706 FAM209BQ5JX69 171 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 FAM219AQ8IW50 185 aa13.39□□□□□ -0.27
CDK4-208ENST00000551706 RBPMSQ93062 196 aaKnown RBP13.39□□□□□ -0.27
CDK4-208ENST00000551706 LSM10Q969L4 123 aaKnown RBP13.39□□□□□ -0.27
CDK4-208ENST00000551706 RANGRFQ9HD47 186 aaPredicted RBP13.39□□□□□ -0.27
CDK4-208ENST00000551706 PRH1P02810 166 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 P0C879 139 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 IGLL1P15814 213 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 AKR1C4P17516 323 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 ATP5G2Q06055 141 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 KLK9Q2XQG4 91 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 TMEM128Q5BJH2 165 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 ZNF343Q6P1L6 599 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 ZNF429Q86V71 674 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 IL22RA2Q969J5 263 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 TMEM230Q96A57 120 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 CCDC32Q9BV29 185 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 ALX4Q9H161 411 aaPredicted RBP13.38□□□□□ -0.27
CDK4-208ENST00000551706 KLK9Q9UKQ9 250 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 TMEM56-RWDD3S4R434 201 aa13.38□□□□□ -0.27
CDK4-208ENST00000551706 DNAH3Q8TD57 4116 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 IGHV4OR15-8A0A075B7B6 117 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 A0A087WW49 117 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 REG1AP05451 166 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 OR13C7P0DN81 318 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 HSPE1P61604 102 aaKnown RBP13.37□□□□□ -0.27
CDK4-208ENST00000551706 SRPXP78539 464 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 OXLD1Q5BKU9 147 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 TMED4Q7Z7H5 227 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 OR10W1Q8NGF6 305 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 THYN1Q9P016 225 aa13.37□□□□□ -0.27
CDK4-208ENST00000551706 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 DBX1A6NMT0 343 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 OR2J3O76001 311 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 ZP3P21754 424 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 MECP2P51608 486 aaKnown RBP13.36□□□□□ -0.27
CDK4-208ENST00000551706 TMEM187Q14656 261 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 C15orf32Q32M92 178 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 TMEM268Q5VZI3 342 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 SELENOHQ8IZQ5 122 aaKnown RBP13.36□□□□□ -0.27
CDK4-208ENST00000551706 OR1L6Q8NGR2 347 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 FANCD2OSQ96PS1 177 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
CDK4-208ENST00000551706 PEF1Q9UBV8 284 aaKnown RBP13.36□□□□□ -0.27
CDK4-208ENST00000551706 FBXL7Q9UJT9 491 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms