RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 SELENOHQ8IZQ5 122 aaKnown RBP13.06□□□□□ -0.32
CCDC38-203ENST00000546803 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
CCDC38-203ENST00000546803 USMG5Q96IX5 58 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 GNB4Q9HAV0 340 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 NDUFA4L2Q9NRX3 87 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 ANK2Q01484 3957 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 IGLC7A0M8Q6 106 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 I3L521 148 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 RBMXL2O75526 392 aaKnown RBP13.05□□□□□ -0.32
CCDC38-203ENST00000546803 AREGP15514 252 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 CTRB1P17538 263 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 BTCP35070 178 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 TMEM268Q5VZI3 342 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 CTRB2Q6GPI1 263 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 ZNF429Q86V71 674 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 MRPL41Q8IXM3 137 aaKnown RBP13.05□□□□□ -0.32
CCDC38-203ENST00000546803 LGI3Q8N145 548 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 LHFPL5Q8TAF8 219 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 LSM10Q969L4 123 aaKnown RBP13.05□□□□□ -0.32
CCDC38-203ENST00000546803 P2RX4Q99571 388 aa13.05□□□□□ -0.32
CCDC38-203ENST00000546803 TRBV9A0A0B4J1U6 114 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 C13orf42A0A1B0GVH6 325 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 FAM223BA6NKX1 122 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 LGALS1P09382 135 aaKnown RBP13.04□□□□□ -0.32
CCDC38-203ENST00000546803 HSPE1P61604 102 aaKnown RBP13.04□□□□□ -0.32
CCDC38-203ENST00000546803 KLK9Q2XQG4 91 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 ETV3LQ6ZN32 361 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 FAM223AQ8IWN6 122 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 WFDC9Q8NEX5 89 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 RAX2Q96IS3 184 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 HINT2Q9BX68 163 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 KLK9Q9UKQ9 250 aa13.04□□□□□ -0.32
CCDC38-203ENST00000546803 A0A0B4J293 547 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 DBX1A6NMT0 343 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 CYB5BO43169 146 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 UPK1BO75841 260 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 DEFA4P12838 97 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 HIST1H1BP16401 226 aaKnown RBP13.03□□□□□ -0.32
CCDC38-203ENST00000546803 VAMP1P23763 118 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 RHOGP84095 191 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 IZUMO4Q1ZYL8 232 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 NECAP1Q8NC96 275 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 OR10W1Q8NGF6 305 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 OR5B12Q96R08 314 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
CCDC38-203ENST00000546803 A0A0B4J2A0 478 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 A0A0G2JRQ6 117 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 SFT2D2O95562 160 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 PRH1P02810 166 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 OR13C7P0DN81 318 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 CD33P20138 364 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 RAB25P57735 213 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 PRCDQ00LT1 54 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 PPP1R1AQ13522 171 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 FHL3Q13643 280 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 DEFB136Q30KP8 78 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 MZT2BQ6NZ67 158 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 LINC00482Q8N8I6 264 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 OR11H1Q8NG94 326 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 DPF1Q92782 380 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 PDCD10Q9BUL8 212 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.02□□□□□ -0.33
CCDC38-203ENST00000546803 CACFD1Q9UGQ2 172 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 SHPKQ9UHJ6 478 aa13.02□□□□□ -0.33
CCDC38-203ENST00000546803 DUXBA0A1W2PPF3 345 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 ST8SIA3O43173 380 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 IGHV3-11P01762 117 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 HSPB1P04792 205 aaKnown RBP13.01□□□□□ -0.33
CCDC38-203ENST00000546803 REG1AP05451 166 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 OR8U8P0C7N1 319 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 MECP2P51608 486 aaKnown RBP13.01□□□□□ -0.33
CCDC38-203ENST00000546803 ATP5G2Q06055 141 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 WT1-ASQ06250 92 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 ZNF616Q08AN1 781 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 ASAH1Q13510 395 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 AARDQ4LEZ3 155 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 FAM209BQ5JX69 171 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 SLC35G3Q8N808 338 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 LRTM2Q8N967 370 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 GPR146Q96CH1 333 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 FANCD2OSQ96PS1 177 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 DUX3Q96PT4 197 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 FLVCR2Q9UPI3 526 aa13.01□□□□□ -0.33
CCDC38-203ENST00000546803 IGLV11-55A0A075B6I3 123 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 OR2J3O76001 311 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 IFNA17P01571 189 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 Q6ZRM9 215 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 OR1L6Q8NGR2 347 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 OR52E5Q8NH55 327 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 ALX4Q9H161 411 aaPredicted RBP13□□□□□ -0.33
CCDC38-203ENST00000546803 PLEKHA3Q9HB20 300 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 RANGRFQ9HD47 186 aaPredicted RBP13□□□□□ -0.33
CCDC38-203ENST00000546803 PRR13Q9NZ81 148 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 THYN1Q9P016 225 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 FBXL7Q9UJT9 491 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 TBC1D24Q9ULP9 559 aa13□□□□□ -0.33
CCDC38-203ENST00000546803 TNCP24821 2201 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms