RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 OMGP23515 440 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 PRTN3P24158 256 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 GPR12P47775 334 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 COMPP49747 757 aaPredicted RBP6.82□□□□□ -1.32
VPS29-203ENST00000546588 RPL30P62888 115 aaKnown RBP6.82□□□□□ -1.32
VPS29-203ENST00000546588 ZNF345Q14585 488 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 HLA-DRB5Q30154 266 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 ZFP69Q49AA0 526 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 DHRS7BQ6IAN0 325 aaPredicted RBP6.82□□□□□ -1.32
VPS29-203ENST00000546588 HCP5Q6MZN7 132 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 GSG1LQ6UXU4 331 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 SLC35G3Q8N808 338 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 STXBP6Q8NFX7 210 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 OR4D5Q8NGN0 318 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 CASTOR1Q8WTX7 329 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 OR10C1Q96KK4 312 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 C2orf50Q96LR7 162 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 SIRPDQ9H106 197 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 C11orf1Q9H5F2 150 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 GEMIN7Q9H840 131 aaKnown RBP6.82□□□□□ -1.32
VPS29-203ENST00000546588 ZNF430Q9H8G1 570 aaPredicted RBP6.82□□□□□ -1.32
VPS29-203ENST00000546588 PRRC2AP48634 2157 aaKnown RBP6.82□□□□□ -1.32
VPS29-203ENST00000546588 CSMD2Q7Z408 3487 aa6.82□□□□□ -1.32
VPS29-203ENST00000546588 ARHGAP32A7KAX9 2087 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 LOC105371242A0A075B767 164 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 MPTX1A8MV57 137 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 LEUTXA8MZ59 168 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 FAM90A26D6RGX4 464 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 LY6LH3BQJ8 138 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 SMLR1H3BR10 107 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 RBMXL2O75526 392 aaKnown RBP6.81□□□□□ -1.32
VPS29-203ENST00000546588 FOXH1O75593 365 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 ADAP1O75689 374 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 HPRT1P00492 218 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 ZFP36P26651 326 aaKnown RBP6.81□□□□□ -1.32
VPS29-203ENST00000546588 THBS3P49746 956 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 ATP5J2P56134 94 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 ZNF816Q0VGE8 651 aaPredicted RBP6.81□□□□□ -1.32
VPS29-203ENST00000546588 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 GGNBP1Q5YKI7 109 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 LYZL2Q7Z4W2 148 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 TGIF2LXQ8IUE1 241 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 C9orf62Q8N4C0 152 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 OR11H4Q8NGC9 324 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 OR4P4Q8NGL7 312 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 OR2T35Q8NGX2 323 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 H1FXQ92522 213 aaKnown RBP6.81□□□□□ -1.32
VPS29-203ENST00000546588 SMIM12Q96EX1 92 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 SEC22AQ96IW7 307 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 SPIN2AQ99865 258 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 ASCL2Q99929 193 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 SPIN2BQ9BPZ2 258 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 CLEC7AQ9BXN2 247 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 TMPRSS5Q9H3S3 457 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
VPS29-203ENST00000546588 CELSR2Q9HCU4 2923 aa6.81□□□□□ -1.32
VPS29-203ENST00000546588 USP9YO00507 2555 aaPredicted RBP6.8□□□□□ -1.32
VPS29-203ENST00000546588 IGHV4-30-2A0A087WSY4 118 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 NBPF19A0A087WUL8 3843 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 A0A1B0GU03 582 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 ATG12O94817 140 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 MPC2O95563 127 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 IFNA21P01568 189 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 SERPINE2P07093 398 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 PET100P0DJ07 73 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 RRASP10301 218 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 CD81P60033 236 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 SP6Q3SY56 376 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 MIDNQ504T8 468 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 Q5BKY6 102 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 TMEM268Q5VZI3 342 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 LAMTOR1Q6IAA8 161 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 C11orf87Q6NUJ2 197 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 SPNS3Q6ZMD2 512 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 OR51H1Q8NH63 302 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 PPP1R1CQ8WVI7 109 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 SAT2Q96F10 170 aaPredicted RBP6.8□□□□□ -1.32
VPS29-203ENST00000546588 C14orf144Q96I85 54 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 S1PR3Q99500 378 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 SIRT7Q9NRC8 400 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 CACFD1Q9UGQ2 172 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 KCNS2Q9ULS6 477 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 TNFSF18Q9UNG2 199 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 RBM7Q9Y580 266 aaKnown RBP6.8□□□□□ -1.32
VPS29-203ENST00000546588 MMP24Q9Y5R2 645 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 LRRK2Q5S007 2527 aa6.8□□□□□ -1.32
VPS29-203ENST00000546588 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 OOSP1A8MZH6 123 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 BUB1B-PAK6H3BSN5 160 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 I3L521 148 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 TNFSF12O43508 249 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 RAMP3O60896 148 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 SIX6O95475 246 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 NBEAP1P0C6P0 100 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 CT45A6P0DMU7 189 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 CT45A5P0DMU8 189 aa6.79□□□□□ -1.32
VPS29-203ENST00000546588 CT45A7P0DMV0 189 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms