RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 A0A087WWC5 75 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 IGHV2-26A0A0B4J1V2 119 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 C7orf77A4D0Y5 90 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 CXorf65A6NEN9 183 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 ODF3BA8MYP8 253 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 C9JQL5 133 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 M0R036 132 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 M0R1W7 72 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 MPDU1O75352 247 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 METTL15P1P0C7V9 234 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 USF1P22415 310 aaPredicted RBP5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 DUTP33316 252 aaKnown RBP5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 GNG10P50151 68 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 ATP5IP56385 69 aaPredicted RBP5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 ERVK-16P61578 105 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 ARF6P62330 175 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 SLC38A11Q08AI6 406 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 PNRC1Q12796 327 aaPredicted RBP5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 KLRD1Q13241 179 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 COTL1Q14019 142 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 TMEM41BQ5BJD5 291 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 TMEM88Q6PEY1 159 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 PRSS57Q6UWY2 283 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 C1orf122Q6ZSJ8 110 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 WFDC11Q8NEX6 87 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 OR4P4Q8NGL7 312 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 DTD1Q8TEA8 209 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 TAF15Q92804 592 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 RAB39BQ96DA2 213 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 S1PR3Q99500 378 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 TMEM147Q9BVK8 224 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 BIN3Q9NQY0 253 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 SIRT7Q9NRC8 400 aa5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 SONP18583 2426 aaKnown RBP5.67□□□□□ -1.5
HMGCS2-204ENST00000544913 MARCH11A6NNE9 402 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 COLCA2A8K830 154 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 LY6LH3BQJ8 138 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 J3QR06 171 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ENSAO43768 121 aaKnown RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 RBMXL2O75526 392 aaKnown RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 IAPPP10997 89 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 NQO2P16083 231 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 HOXB4P17483 251 aaPredicted RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 PRTN3P24158 256 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 MAS1LP35410 378 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 G6PCP35575 357 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 THBS3P49746 956 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 RAB13P51153 203 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 SPCS3P61009 180 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 RAB5BP61020 215 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 PAX8Q06710 450 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 LOXL1Q08397 574 aaPredicted RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 TMEM267Q0VDI3 215 aaPredicted RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ZNF816Q0VGE8 651 aaPredicted RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 VWC2Q2TAL6 325 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 NCR3LG1Q68D85 454 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 BTNL3Q6UXE8 466 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ZNF833PQ6ZTB9 187 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 SLC35E3Q7Z769 313 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ZNF429Q86V71 674 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 CIARTQ8N365 385 aaPredicted RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ZNF709Q8N972 641 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 MAPK1IP1LQ8NDC0 245 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 OR11H6Q8NGC7 330 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 R3HDM4Q96D70 268 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 OR4C12Q96R67 309 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 LPAR2Q9HBW0 351 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ONECUT1Q9UBC0 465 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 INSIG2Q9Y5U4 225 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 HIVEP1P15822 2718 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 CEBPZOSA8MTT3 80 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 C1orf196B1AJZ1 125 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 RNF223E7ERA6 249 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 H3BP45 60 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 RAMP3O60896 148 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 FOXH1O75593 365 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 S1PR2O95136 353 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 NXPH3O95157 252 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 SRP19P09132 144 aaKnown RBP5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 TMEM11P17152 192 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 RUNX1Q01196 453 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 TMEM249Q2WGJ8 235 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 HLA-DRB5Q30154 266 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 AWAT1Q58HT5 328 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 VMO1Q7Z5L0 202 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 CBLN2Q8IUK8 224 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ABHD12Q8N2K0 398 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 PNKDQ8N490 385 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 ZNF383Q8NA42 475 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 OR4A16Q8NH70 328 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 OR4S2Q8NH73 311 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 OR9G1Q8NH87 305 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 MALSU1Q96EH3 234 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 TVP23CQ96ET8 276 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 Q96MF0 132 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 TMEM68Q96MH6 324 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 NIPSNAP3BQ9BS92 247 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 KCNIP2Q9NS61 270 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 RPRMQ9NS64 109 aa5.66□□□□□ -1.5
HMGCS2-204ENST00000544913 SLC39A9Q9NUM3 307 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms