RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ANK1P16157 1881 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.69
CHD4-211ENST00000544484 CGAP01215 116 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 CENPWQ5EE01 88 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 IFI27L2Q9H2X8 130 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 CADP27708 2225 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 FER1L5A0AVI2 2057 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 A0A0B4J293 547 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 FAM53AQ6NSI3 398 aaPredicted RBP10.77□□□□□ -0.69
CHD4-211ENST00000544484 SYT8Q8NBV8 401 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 AREGP15514 252 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 LYRM7Q5U5X0 104 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 FOXF2Q12947 444 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 OR10S1Q8NGN2 331 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 SCN8AQ9UQD0 1980 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 H3BVH4 76 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 GCGP01275 180 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 PKIAP61925 76 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 OR1P1Q8NH06 330 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 SEMA5BQ9P283 1151 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 TM4SF5O14894 197 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 GCSHP23434 173 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 AMMECR1LQ6DCA0 310 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 FAM168AQ92567 244 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 FBXL7Q9UJT9 491 aa10.76□□□□□ -0.69
CHD4-211ENST00000544484 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 FBLL1A6NHQ2 334 aaKnown RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 CIDEAO60543 219 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 LEPROTL1O95214 131 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 NUDT3O95989 172 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 DICER1Q9UPY3 1922 aaKnown RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 SFRP2Q96HF1 295 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 PSMG3Q9BT73 122 aaPredicted RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 MRPL32Q9BYC8 188 aaKnown RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 GPR61Q9BZJ8 451 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 C7orf69Q9H7B7 122 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 ZMAT5Q9UDW3 170 aaKnown RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 MUC21A0A0G2JKD1 596 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 MUC21A0A140T8X8 626 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 GPR183P32249 361 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 MUC21Q5SSG8 566 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 UQCRFS1P47985 274 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 NEU4Q8WWR8 484 aaPredicted RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 RAX2Q96IS3 184 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 PLSCR2Q9NRY7 297 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 NBEAP1P0C6P0 100 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 CSRP1P21291 193 aaKnown RBP10.75□□□□□ -0.69
CHD4-211ENST00000544484 WDR82Q6UXN9 313 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 C19orf24Q9BVV8 132 aa10.75□□□□□ -0.69
CHD4-211ENST00000544484 IGLV3-32A0A0A0MS00 114 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 TGFAP01135 160 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 CBY1Q9Y3M2 126 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 A6NDN8 102 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 H7C2G1 150 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 ZIC4Q8N9L1 334 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 CDC42EP3Q9UKI2 254 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 LINC00312Q9Y6C7 94 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 IGKV3OR2-268A0A0C4DH90 116 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 SAA2-SAA4A0A096LPE2 208 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 IGHV1-18A0A0C4DH31 117 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 FAM181BA6NEQ2 426 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 NPIPB6E9PJ23 425 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 UBE2L6O14933 153 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 SAA2P0DJI9 122 aaPredicted RBP10.74□□□□□ -0.69
CHD4-211ENST00000544484 CBLN1P23435 193 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 FOXA3P55318 350 aaPredicted RBP10.74□□□□□ -0.69
CHD4-211ENST00000544484 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 MAP1LC3AQ9H492 121 aa10.74□□□□□ -0.69
CHD4-211ENST00000544484 A0A0G2JMZ2 1700 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 LRRC37A2A6NM11 1700 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 C9JCJ5 164 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 SLC17A3O00476 420 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 C19orf54Q5BKX5 351 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 RNF222A6NCQ9 220 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 TRGC1P0CF51 173 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 PAQR4Q8N4S7 273 aaPredicted RBP10.73□□□□□ -0.69
CHD4-211ENST00000544484 SLC25A28Q96A46 364 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 DMRTA2Q96SC8 542 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 TRBV6-7A0A0A0MS04 114 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 TRAV24A0A0B4J272 114 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 BTCP35070 178 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 SPATA45Q537H7 98 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 ATOH7Q8N100 152 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 RNASE6Q93091 150 aaKnown RBP10.73□□□□□ -0.69
CHD4-211ENST00000544484 TP53BP1Q12888 1972 aaPredicted RBP10.73□□□□□ -0.69
CHD4-211ENST00000544484 IGKV1D-8A0A087WSZ0 117 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 TRAV14DV4A0A0A6YYC5 116 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 ZNF56Q15929 161 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 CLEC19AQ6UXS0 136 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 TEX29Q8N6K0 151 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 CLDND2Q8NHS1 167 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 GPR82Q96P67 336 aa10.73□□□□□ -0.69
CHD4-211ENST00000544484 C21orf62Q9NYP8 219 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms