RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ALX4Q9H161 411 aaPredicted RBP14.78□□□□□ -0.04
DDX55-211ENST00000544429 FKBP11Q9NYL4 201 aa14.78□□□□□ -0.04
DDX55-211ENST00000544429 A0A0G2JLM5 398 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 A0A0G2JRQ6 117 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 SNAPC5O75971 98 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 TMEM187Q14656 261 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 KPRPQ5T749 579 aaPredicted RBP14.77□□□□□ -0.05
DDX55-211ENST00000544429 HSD17B13Q7Z5P4 300 aaPredicted RBP14.77□□□□□ -0.05
DDX55-211ENST00000544429 ZNF429Q86V71 674 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 SGPP2Q8IWX5 399 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 OR11H1Q8NG94 326 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 OR10W1Q8NGF6 305 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 OR5B12Q96R08 314 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 C7orf50Q9BRJ6 194 aaKnown RBP14.77□□□□□ -0.05
DDX55-211ENST00000544429 CCDC32Q9BV29 185 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 ZNF355PQ9NSJ1 428 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 OR51B2Q9Y5P1 312 aa14.77□□□□□ -0.05
DDX55-211ENST00000544429 A0A0B4J293 547 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 FAM223BA6NKX1 122 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 PLA2G10O15496 165 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 ATG12O94817 140 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 PRH1P02810 166 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 TRAPPC2P0DI81 140 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 TRAPPC2BP0DI82 140 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 RHOGP84095 191 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 WT1-ASQ06250 92 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 ZNF616Q08AN1 781 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 RBMS2Q15434 407 aaKnown RBP14.76□□□□□ -0.05
DDX55-211ENST00000544429 IZUMO4Q1ZYL8 232 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 TRIM16LQ309B1 348 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 AARDQ4LEZ3 155 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 ZNF343Q6P1L6 599 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 C19orf35Q6ZS72 473 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 FAM223AQ8IWN6 122 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 SELENOHQ8IZQ5 122 aaKnown RBP14.76□□□□□ -0.05
DDX55-211ENST00000544429 NECAP1Q8NC96 275 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 OR1N2Q8NGR9 330 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 S100ZQ8WXG8 99 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 RBPMSQ93062 196 aaKnown RBP14.76□□□□□ -0.05
DDX55-211ENST00000544429 DMRT1Q9Y5R6 373 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 MEGF8Q7Z7M0 2845 aa14.76□□□□□ -0.05
DDX55-211ENST00000544429 IGLV11-55A0A075B6I3 123 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 NDUFB6O95139 128 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 IGHV3-11P01762 117 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 CD33P20138 364 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 CCR6P51684 374 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 DEFA5Q01523 94 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 TMEM128Q5BJH2 165 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 IL22RA2Q969J5 263 aa14.75□□□□□ -0.05
DDX55-211ENST00000544429 RCC1LQ96I51 464 aaKnown RBP14.75□□□□□ -0.05
DDX55-211ENST00000544429 IGHV4OR15-8A0A075B7B6 117 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 A0A087WW49 117 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 G3V4G9 280 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 HSPB1P04792 205 aaKnown RBP14.74□□□□□ -0.05
DDX55-211ENST00000544429 OR8U8P0C7N1 319 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 AKR1C4P17516 323 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 INPP1P49441 399 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 AKR1C2P52895 323 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 Q6ZRM9 215 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 FAM219AQ8IW50 185 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 LSM10Q969L4 123 aaKnown RBP14.74□□□□□ -0.05
DDX55-211ENST00000544429 KCNIP3Q9Y2W7 256 aa14.74□□□□□ -0.05
DDX55-211ENST00000544429 C13orf42A0A1B0GVH6 325 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 DUS4LO95620 317 aaKnown RBP14.73□□□□□ -0.05
DDX55-211ENST00000544429 DHFRP00374 187 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 REG1AP05451 166 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 IGLL1P15814 213 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 HSPE1P61604 102 aaKnown RBP14.73□□□□□ -0.05
DDX55-211ENST00000544429 PRCDQ00LT1 54 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 BEAN1Q3B7T3 259 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 OXLD1Q5BKU9 147 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 OR4A16Q8NH70 328 aa14.73□□□□□ -0.05
DDX55-211ENST00000544429 CENPXA8MT69 81 aa14.72□□□□□ -0.05
DDX55-211ENST00000544429 INS-IGF2F8WCM5 200 aa14.72□□□□□ -0.05
DDX55-211ENST00000544429 LINC01619G3V211 115 aa14.72□□□□□ -0.05
DDX55-211ENST00000544429 WIPF1O43516 503 aa14.72□□□□□ -0.05
DDX55-211ENST00000544429 TMEM268Q5VZI3 342 aa14.72□□□□□ -0.05
DDX55-211ENST00000544429 TMED4Q7Z7H5 227 aa14.72□□□□□ -0.05
DDX55-211ENST00000544429 RRNAD1Q96FB5 475 aaKnown RBP14.72□□□□□ -0.05
DDX55-211ENST00000544429 PRR13Q9NZ81 148 aa14.72□□□□□ -0.05
DDX55-211ENST00000544429 DNAH3Q8TD57 4116 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 LINC00854A0A1B0GVQ3 168 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 ST8SIA3O43173 380 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 OR2J3O76001 311 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 OR13C7P0DN81 318 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 HIST1H1BP16401 226 aaKnown RBP14.71□□□□□ -0.05
DDX55-211ENST00000544429 UBE2MP61081 183 aaKnown RBP14.71□□□□□ -0.05
DDX55-211ENST00000544429 C15orf32Q32M92 178 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 PDLIM3Q53GG5 364 aaPredicted RBP14.71□□□□□ -0.05
DDX55-211ENST00000544429 NMSQ5H8A3 153 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 CENPSQ8N2Z9 138 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 SLC35G3Q8N808 338 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 LRTM2Q8N967 370 aa14.71□□□□□ -0.05
DDX55-211ENST00000544429 RANGRFQ9HD47 186 aaPredicted RBP14.71□□□□□ -0.05
DDX55-211ENST00000544429 F11RQ9Y624 299 aaKnown RBP14.71□□□□□ -0.05
DDX55-211ENST00000544429 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.7□□□□□ -0.06
DDX55-211ENST00000544429 A0A0B4J2A0 478 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 LYRM1O43325 122 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 NDUFB8O95169 186 aa14.7□□□□□ -0.06
DDX55-211ENST00000544429 TRBV12-3P01733 135 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms