RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 AMBPP02760 352 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 IL6RP08887 468 aaPredicted RBP12.34□□□□□ -0.43
VARS2-211ENST00000541562 IRF2P14316 349 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 OR10J1P30954 320 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 SELENOVP59797 346 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 ZNF90Q03938 601 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 SRSF7Q16629 238 aaKnown RBP eCLIP12.34□□□□□ -0.43
VARS2-211ENST00000541562 MORN5Q5VZ52 161 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 STUMQ69YW2 141 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
VARS2-211ENST00000541562 OR51B2Q9Y5P1 312 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 IGHV1-46P01743 117 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 IGHV2-70P01814 119 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 KITLGP21583 273 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 IL3RAP26951 378 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 IER3P46695 156 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 LOXL3P58215 753 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 RELBQ01201 579 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 GGTLC1Q9BX51 225 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 PLEKHA3Q9HB20 300 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 SLC35D1Q9NTN3 355 aa12.34□□□□□ -0.43
VARS2-211ENST00000541562 MDFIC2A0A1B0GVS7 189 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 HPRT1P00492 218 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 TIMP3P35625 211 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 CYP2G1PQ6ZSU1 146 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 ABHD17AQ96GS6 310 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 PLSCR4Q9NRQ2 329 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 OR4A8P0C604 315 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 C17orf58Q2M2W7 97 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 SLC24A4Q8NFF2 622 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 MALSU1Q96EH3 234 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 SNIP1Q8TAD8 396 aaKnown RBP12.33□□□□□ -0.44
VARS2-211ENST00000541562 RITA1Q96K30 269 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 MRPL20Q9BYC9 149 aaKnown RBP12.33□□□□□ -0.44
VARS2-211ENST00000541562 TPSG1Q9NRR2 321 aa12.33□□□□□ -0.44
VARS2-211ENST00000541562 A0A087X0M5 115 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 A0A1B0GX30 115 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 PFN1P07737 140 aaKnown RBP12.32□□□□□ -0.44
VARS2-211ENST00000541562 OR5G3P0C626 314 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 PYYP10082 97 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 TCEAL7Q9BRU2 100 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 SIRT7Q9NRC8 400 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 VPS13CQ709C8 3753 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 IGHG3P01860 377 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 COX7A1P24310 79 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 FOXC1Q12948 553 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 PQLC2Q6ZP29 291 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 LINC01551Q86U37 167 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 PPP1R35Q8TAP8 253 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 CIB3Q96Q77 187 aaPredicted RBP12.32□□□□□ -0.44
VARS2-211ENST00000541562 POLQO75417 2590 aa12.32□□□□□ -0.44
VARS2-211ENST00000541562 A0A1B0GW64 132 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 MOSP00540 346 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 SSX2Q16385 188 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 RNF7Q9UBF6 113 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 CREBBPQ92793 2442 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 A0A087WWC5 75 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 NPIPB11E5RHQ5 1161 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 SPCS3P61009 180 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 BSPH1Q075Z2 132 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 CYB5R2Q6BCY4 276 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 OR8I2Q8N0Y5 310 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 OR10X1Q8NGY0 326 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 OR1P1Q8NH06 330 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 LURAP1Q96LR2 239 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 HARBI1Q96MB7 349 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 ADH4P08319 380 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 ORM2P19652 201 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 NUBP1P53384 320 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 EFNB3Q15768 340 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 ZCCHC14Q8WYQ9 949 aaKnown RBP12.31□□□□□ -0.44
VARS2-211ENST00000541562 PRDM13Q9H4Q3 707 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
VARS2-211ENST00000541562 COL27A1Q8IZC6 1860 aaPredicted RBP12.31□□□□□ -0.44
VARS2-211ENST00000541562 HRASP01112 189 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 FAM87AP0C7U9 286 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 PNRC1Q12796 327 aaPredicted RBP12.3□□□□□ -0.44
VARS2-211ENST00000541562 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 IGKV1OR2-108A0A075B7D4 117 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 TRAV1-1A0A0B4J248 108 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 SLC25A17O43808 307 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 GPX4P36969 197 aaPredicted RBP12.3□□□□□ -0.44
VARS2-211ENST00000541562 CSMD2Q7Z408 3487 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 CSPG4Q6UVK1 2322 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 WNT2P09544 360 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 CD40P25942 277 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 TDRG1Q3Y452 100 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 OR4S2Q8NH73 311 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
VARS2-211ENST00000541562 IGHV3OR16-8A0A075B7F1 116 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 SAA1P0DJI8 122 aaPredicted RBP12.29□□□□□ -0.44
VARS2-211ENST00000541562 CNTFRP26992 372 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 OPRK1P41145 380 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 RUSC1-AS1Q66K80 236 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 TEPPQ6URK8 271 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 Q8N7P7 452 aa12.29□□□□□ -0.44
VARS2-211ENST00000541562 DYNLRB1Q9NP97 96 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms