RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 IGLC7A0M8Q6 106 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 OVOL1O14753 267 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 DHFRP00374 187 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 CRYGCP07315 174 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 FGF2P09038 288 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 TRAPPC2P0DI81 140 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 TRAPPC2BP0DI82 140 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 CTRB1P17538 263 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 FAUP35544 74 aaKnown RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 ETV6P41212 452 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 KRTAP10-11P60412 298 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 ATP5G2Q06055 141 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 EXOSC2Q13868 293 aaKnown RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 KLF9Q13886 244 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 SURF2Q15527 256 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 C15orf32Q32M92 178 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 C9orf66Q5T8R8 295 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 CTRB2Q6GPI1 263 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 ZNF343Q6P1L6 599 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 CADM3Q8N126 398 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 NECAP1Q8NC96 275 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 OR10W1Q8NGF6 305 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 OR6Q1Q8NGQ2 317 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 OR1L8Q8NGR8 309 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 SEC22AQ96IW7 307 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 TSC22D3Q99576 134 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 RTBDNQ9BSG5 229 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 C5orf66Q9H5L9 145 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 RANGRFQ9HD47 186 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 AURKAIP1Q9NWT8 199 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 SLC2A8Q9NY64 477 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 FKBP11Q9NYL4 201 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 PEF1Q9UBV8 284 aaKnown RBP7.11□□□□□ -1.27
SNHG1-215ENST00000540904 FBXL7Q9UJT9 491 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 PRNDQ9UKY0 176 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 NOTCH3Q9UM47 2321 aa7.11□□□□□ -1.27
SNHG1-215ENST00000540904 NOTCH1P46531 2555 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 C15orf61A6NNL5 157 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 IGKV1-5P01602 117 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 TRBV12-3P01733 135 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 OR5AC1P0C628 307 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 OR13C7P0DN81 318 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 ZP3P21754 424 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 AKR1C2P52895 323 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 IZUMO4Q1ZYL8 232 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 THOC7Q6I9Y2 204 aaKnown RBP7.1□□□□□ -1.27
SNHG1-215ENST00000540904 REC114Q7Z4M0 266 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 OR5B3Q8NH48 314 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 OR4A16Q8NH70 328 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 FANCD2OSQ96PS1 177 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 SRSF8Q9BRL6 282 aaKnown RBP7.1□□□□□ -1.27
SNHG1-215ENST00000540904 SRRQ9GZT4 340 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 NAA60Q9H7X0 242 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 NDUFA4L2Q9NRX3 87 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 TMEM14BQ9NUH8 114 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 GPR132Q9UNW8 380 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 S4R3C0 116 aa7.1□□□□□ -1.27
SNHG1-215ENST00000540904 TNCP24821 2201 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 CRYM-AS1A6NIL9 109 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 SAP30O75446 220 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 B3GALNT1O75752 331 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 ATG12O94817 140 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 NDUFB8O95169 186 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 IGHV3-23P01764 117 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 HIST1H1BP16401 226 aaKnown RBP7.09□□□□□ -1.27
SNHG1-215ENST00000540904 UCP1P25874 307 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 INPP1P49441 399 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 MECP2P51608 486 aaKnown RBP7.09□□□□□ -1.27
SNHG1-215ENST00000540904 SYNJ2BPP57105 145 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 WT1-ASQ06250 92 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 EGFEM1PQ0D2K5 195 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 RPEL1Q2QD12 228 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 ZNF57Q68EA5 555 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-215ENST00000540904 GDPD1Q8N9F7 314 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 RNASE11Q8TAA1 199 aaKnown RBP7.09□□□□□ -1.27
SNHG1-215ENST00000540904 MRAPQ8TCY5 172 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 GLYATL2Q8WU03 294 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 LSM10Q969L4 123 aaKnown RBP7.09□□□□□ -1.27
SNHG1-215ENST00000540904 RRNAD1Q96FB5 475 aaKnown RBP7.09□□□□□ -1.27
SNHG1-215ENST00000540904 SCGB3A2Q96PL1 93 aa7.09□□□□□ -1.27
SNHG1-215ENST00000540904 IGLV11-55A0A075B6I3 123 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.08□□□□□ -1.28
SNHG1-215ENST00000540904 A0A0B4J293 547 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 BMPR1BO00238 502 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 CYB5BO43169 146 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 P0C879 139 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 AKR1C4P17516 323 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 INSL3P51460 131 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-215ENST00000540904 BAK1Q16611 211 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 TRIQKQ629K1 86 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 SLC25A24Q6NUK1 477 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 ACSM6Q6P461 480 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 HSD17B13Q7Z5P4 300 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-215ENST00000540904 TMED4Q7Z7H5 227 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 SGPP2Q8IWX5 399 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 TMEM230Q96A57 120 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 EEF1AKMT3Q96AZ1 226 aa7.08□□□□□ -1.28
SNHG1-215ENST00000540904 TMEM56Q96MV1 263 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms