RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ACSM6Q6P461 480 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 OR51S1Q8NGJ8 323 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 SRSF8Q9BRL6 282 aaKnown RBP12.95□□□□□ -0.34
CD9-209ENST00000540891 NDUFA4L2Q9NRX3 87 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 SLC2A8Q9NY64 477 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 COPZ2Q9P299 210 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 FBXL7Q9UJT9 491 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 GPR132Q9UNW8 380 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 OR51B2Q9Y5P1 312 aa12.95□□□□□ -0.34
CD9-209ENST00000540891 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.94□□□□□ -0.34
CD9-209ENST00000540891 C15orf61A6NNL5 157 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 SNAPC5O75971 98 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 IGKV1-5P01602 117 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 SERPINE2P07093 398 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 TRAPPC2P0DI81 140 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 TRAPPC2BP0DI82 140 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 ZP3P21754 424 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 S100A5P33763 92 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 ECI1P42126 302 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 WT1-ASQ06250 92 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 KLF9Q13886 244 aaPredicted RBP12.94□□□□□ -0.34
CD9-209ENST00000540891 KLF5Q13887 457 aaPredicted RBP12.94□□□□□ -0.34
CD9-209ENST00000540891 SURF2Q15527 256 aaPredicted RBP12.94□□□□□ -0.34
CD9-209ENST00000540891 SP6Q3SY56 376 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
CD9-209ENST00000540891 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 OR1L8Q8NGR8 309 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 PRRT1Q99946 306 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 TMEM14BQ9NUH8 114 aa12.94□□□□□ -0.34
CD9-209ENST00000540891 BMPR1BO00238 502 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 P0C879 139 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 UCP1P25874 307 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 ETV6P41212 452 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 INSL3P51460 131 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 IZUMO4Q1ZYL8 232 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 OR6Q1Q8NGQ2 317 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 TSC22D3Q99576 134 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 PRNDQ9UKY0 176 aa12.93□□□□□ -0.34
CD9-209ENST00000540891 SAP30O75446 220 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 DHFRP00374 187 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 OR5AC1P0C628 307 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 DEFA4P12838 97 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 HIST1H1BP16401 226 aaKnown RBP12.92□□□□□ -0.34
CD9-209ENST00000540891 H2BFWTQ7Z2G1 175 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 Q8N402 240 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 GDPD1Q8N9F7 314 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 OR5B3Q8NH48 314 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 LSM10Q969L4 123 aaKnown RBP12.92□□□□□ -0.34
CD9-209ENST00000540891 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
CD9-209ENST00000540891 S4R3C0 116 aa12.92□□□□□ -0.34
CD9-209ENST00000540891 MFSD2BA6NFX1 497 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 IGHV3-23P01764 117 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 OR13C7P0DN81 318 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 MFAP2P55001 183 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 SYNJ2BPP57105 145 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 IL34Q6ZMJ4 242 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
CD9-209ENST00000540891 LHFPL5Q8TAF8 219 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 TMEM230Q96A57 120 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 HINT2Q9BX68 163 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 SRRQ9GZT4 340 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 MCUBQ9NWR8 336 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 FKBP11Q9NYL4 201 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 NDUFA13Q9P0J0 144 aa12.91□□□□□ -0.34
CD9-209ENST00000540891 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 CRYM-AS1A6NIL9 109 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 PPP5D1E7EU14 171 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 RPEL1Q2QD12 228 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 TRIM16LQ309B1 348 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 OR4A16Q8NH70 328 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 PRR25Q96S07 402 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 TMEM222Q9H0R3 208 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 ZMAT5Q9UDW3 170 aaKnown RBP12.9□□□□□ -0.34
CD9-209ENST00000540891 SCP2D1Q9UJQ7 156 aa12.9□□□□□ -0.34
CD9-209ENST00000540891 A0A0B4J293 547 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 TEX13DA0A0J9YY54 714 aaPredicted RBP12.89□□□□□ -0.35
CD9-209ENST00000540891 B3GALNT1O75752 331 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 CDS2O95674 445 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 PRCDQ00LT1 54 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 HAPLN4Q86UW8 402 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 TOMM5Q8N4H5 51 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 OR9G4Q8NGQ1 327 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
CD9-209ENST00000540891 F11RQ9Y624 299 aaKnown RBP12.89□□□□□ -0.35
CD9-209ENST00000540891 HLA-AP01891 365 aaKnown RBP12.88□□□□□ -0.35
CD9-209ENST00000540891 AKR1C2P52895 323 aa12.88□□□□□ -0.35
CD9-209ENST00000540891 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
CD9-209ENST00000540891 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
CD9-209ENST00000540891 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
CD9-209ENST00000540891 CLEC19AQ6UXS0 136 aa12.88□□□□□ -0.35
CD9-209ENST00000540891 ZNF502Q8TBZ5 544 aa12.88□□□□□ -0.35
CD9-209ENST00000540891 TMEM56Q96MV1 263 aa12.88□□□□□ -0.35
CD9-209ENST00000540891 OR4C12Q96R67 309 aa12.88□□□□□ -0.35
CD9-209ENST00000540891 SDHCQ99643 169 aaPredicted RBP12.88□□□□□ -0.35
CD9-209ENST00000540891 ELOVL1Q9BW60 279 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms