RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 AKR1C1Q04828 323 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 GRK1Q15835 563 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 KCNJ8Q15842 424 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 ACOT6Q3I5F7 207 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 GLT8D1Q68CQ7 371 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 LYZL1Q6UWQ5 148 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 CLDN22Q8N7P3 220 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 ZNF676Q8N7Q3 588 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 ROPN1LQ96C74 230 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 C8orf76Q96K31 380 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 TIMM9Q9Y5J7 89 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 DSCAMO60469 2012 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 ZNF532Q9HCE3 1301 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 TRAV7A0A075B6U4 112 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 A0A087WUJ7 227 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 TRAV38-1A0A0B4J264 116 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 A0A1B0GV50 99 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 GOLGA6L19H0YKK7 550 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 H7C2G1 150 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 FAAHO00519 579 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 CD79AP11912 226 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 MSNP26038 577 aaKnown RBP0.92□□□□□ -2.26
CCDC7-209ENST00000539197 OMPP47874 163 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 EVX1P49640 407 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 RPS20P60866 119 aaKnown RBP0.92□□□□□ -2.26
CCDC7-209ENST00000539197 TMEM258P61165 79 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 GLO1Q04760 184 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 KISS1Q15726 138 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 TMEM155Q4W5P6 130 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 EFCAB1Q9HAE3 211 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.92□□□□□ -2.26
CCDC7-209ENST00000539197 IL36BQ9NZH7 164 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 MRPL27Q9P0M9 148 aaKnown RBP0.92□□□□□ -2.26
CCDC7-209ENST00000539197 TP73-AS1Q9UF72 201 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 RSL24D1Q9UHA3 163 aaKnown RBP0.92□□□□□ -2.26
CCDC7-209ENST00000539197 NYNRINQ9P2P1 1898 aaKnown RBP0.92□□□□□ -2.26
CCDC7-209ENST00000539197 CHD5Q8TDI0 1954 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 SNAPC4Q5SXM2 1469 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 ARHGAP32A7KAX9 2087 aa0.92□□□□□ -2.26
CCDC7-209ENST00000539197 WRNQ14191 1432 aaPredicted RBP eCLIP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 A0A0D9SEW6 157 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 SMIM9A6NGZ8 99 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 OR4C46A6NHA9 309 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 TMEM114B3SHH9 223 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 TRAPPC2LH3BP13 241 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 PSMD12O00232 456 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 ZNF737O75373 536 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 HLA-DRB1P01911 266 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 PRM2P04554 102 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 SULT1A3P0DMM9 295 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 SULT1A4P0DMN0 295 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 HIST1H1TP22492 207 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 PSMB8P28062 276 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 RPL5P46777 297 aaKnown RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 HAAOP46952 286 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 AQP4P55087 323 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 KRTAP10-4P60372 401 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 PSME3P61289 254 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 RUNX1Q01196 453 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 RPL18Q07020 188 aaKnown RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 Q6ZRN7 208 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 KTN1-AS1Q86SY8 53 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 COA5Q86WW8 74 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 C20orf196Q8IYI0 205 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 LRRC25Q8N386 305 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 RPP25LQ8N5L8 163 aaKnown RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 ANKRD29Q8N6D5 301 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 OR8B12Q8NGG6 310 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 C10orf105Q8TEF2 133 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 OR52E6Q96RD3 313 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 ULBP3Q9BZM4 244 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 WDR61Q9GZS3 305 aaKnown RBP0.91□□□□□ -2.26
CCDC7-209ENST00000539197 XAGE1AQ9HD64 81 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 MTUS2Q5JR59 1369 aa0.91□□□□□ -2.26
CCDC7-209ENST00000539197 FAM236DA0A1B0GTK5 79 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 HMSDA8MTL9 139 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 NOS1APO75052 506 aaPredicted RBP0.9□□□□□ -2.27
CCDC7-209ENST00000539197 CNIH1O95406 144 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 IGKV1-5P01602 117 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 IGHV3-7P01780 117 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 C1QCP02747 245 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 FAM236CP0DP71 79 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 EIF2B2P49770 351 aaKnown RBP0.9□□□□□ -2.27
CCDC7-209ENST00000539197 AP3S2P59780 193 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 SNRPD2P62316 118 aaKnown RBP0.9□□□□□ -2.27
CCDC7-209ENST00000539197 SUPT4H1P63272 117 aaKnown RBP0.9□□□□□ -2.27
CCDC7-209ENST00000539197 HBA1P69905 142 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 CCL20P78556 96 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 FAM27BQ5VT28 67 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 AADACL3Q5VUY0 350 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 Q6ZS49 121 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 SLC36A1Q7Z2H8 476 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 DYNAPQ8N1N2 210 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 SLC7A6Q92536 515 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 DGCR14Q96DF8 476 aaKnown RBP0.9□□□□□ -2.27
CCDC7-209ENST00000539197 DCUN1D1Q96GG9 259 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 DOHHQ9BU89 302 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 DERL1Q9BUN8 251 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 CHST6Q9GZX3 395 aa0.9□□□□□ -2.27
CCDC7-209ENST00000539197 C11orf68Q9H3H3 251 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms