RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CTRB1P17538 263 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 SLC6A1P30531 599 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 WT1-ASQ06250 92 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 FHL3Q13643 280 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 OXLD1Q5BKU9 147 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 CTRB2Q6GPI1 263 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 TMED4Q7Z7H5 227 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 OR1N2Q8NGR9 330 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 FANCD2OSQ96PS1 177 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 FLVCR2Q9UPI3 526 aa13.81□□□□□ -0.2
DDX55-204ENST00000536079 SNAPC5O75971 98 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 OR2J3O76001 311 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 TRBV12-3P01733 135 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 TRAPPC2P0DI81 140 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 TRAPPC2BP0DI82 140 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 CD40LGP29965 261 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 INPP1P49441 399 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 RHOGP84095 191 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 LINC00299Q6ZSB3 139 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 SGPP2Q8IWX5 399 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 OR1L8Q8NGR8 309 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 SCGB3A2Q96PL1 93 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 HINT2Q9BX68 163 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 PRNDQ9UKY0 176 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 ZNF257Q9Y2Q1 563 aa13.8□□□□□ -0.2
DDX55-204ENST00000536079 NDUFB8O95169 186 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 CD33P20138 364 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 SLURP1P55000 103 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 RAB25P57735 213 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 DHODHQ02127 395 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 SPINK9Q5DT21 86 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 SAMD5Q5TGI4 173 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 OR4A16Q8NH70 328 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 GALNT14Q96FL9 552 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 TMEM56Q96MV1 263 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 SLC25A21Q9BQT8 299 aaPredicted RBP13.79□□□□□ -0.2
DDX55-204ENST00000536079 S4R3C0 116 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 TMEM56-RWDD3S4R434 201 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 DNAH3Q8TD57 4116 aa13.79□□□□□ -0.2
DDX55-204ENST00000536079 MEGF8Q7Z7M0 2845 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 C13orf42A0A1B0GVH6 325 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 ANKRD34BA5PLL1 514 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 NAP1L6A6NFF2 107 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 B3GALNT1O75752 331 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 NDUFB6O95139 128 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 OR13C7P0DN81 318 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 AKR1C2P52895 323 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 MFAP2P55001 183 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 KLK9Q2XQG4 91 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 TMEM268Q5VZI3 342 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
DDX55-204ENST00000536079 GPR146Q96CH1 333 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 KLK9Q9UKQ9 250 aa13.78□□□□□ -0.2
DDX55-204ENST00000536079 IGLV11-55A0A075B6I3 123 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 ST8SIA3O43173 380 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 IGHV3-23P01764 117 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 IFITM3Q01628 133 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 ZNF616Q08AN1 781 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 PPP1R1AQ13522 171 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 RBMS2Q15434 407 aaKnown RBP13.77□□□□□ -0.21
DDX55-204ENST00000536079 ANKRD55Q3KP44 614 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 ZNF343Q6P1L6 599 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 SLC25A42Q86VD7 318 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 SLC35G3Q8N808 338 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 S100ZQ8WXG8 99 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 DCUN1D4Q92564 292 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 TSC22D3Q99576 134 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 CCDC32Q9BV29 185 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 FBXL7Q9UJT9 491 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 TBC1D24Q9ULP9 559 aa13.77□□□□□ -0.21
DDX55-204ENST00000536079 NOTCH3Q9UM47 2321 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 HSPE1P61604 102 aaKnown RBP13.76□□□□□ -0.21
DDX55-204ENST00000536079 ATP5G2Q06055 141 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 C15orf32Q32M92 178 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 LYZL2Q7Z4W2 148 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 OR5B3Q8NH48 314 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 DLX4Q92988 240 aaPredicted RBP13.76□□□□□ -0.21
DDX55-204ENST00000536079 LSM10Q969L4 123 aaKnown RBP13.76□□□□□ -0.21
DDX55-204ENST00000536079 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 SRSF8Q9BRL6 282 aaKnown RBP13.76□□□□□ -0.21
DDX55-204ENST00000536079 FKBP11Q9NYL4 201 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 KCNIP3Q9Y2W7 256 aa13.76□□□□□ -0.21
DDX55-204ENST00000536079 NOTCH1P46531 2555 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 A0A0G2JLM5 398 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 FAM223BA6NKX1 122 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 LINC01619G3V211 115 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 LYRM1O43325 122 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 HSPB1P04792 205 aaKnown RBP13.75□□□□□ -0.21
DDX55-204ENST00000536079 PRCDQ00LT1 54 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 EXOSC2Q13868 293 aaKnown RBP13.75□□□□□ -0.21
DDX55-204ENST00000536079 BEAN1Q3B7T3 259 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 TMEM128Q5BJH2 165 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 C11orf87Q6NUJ2 197 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 ZNF429Q86V71 674 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 FAM223AQ8IWN6 122 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 CENPSQ8N2Z9 138 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 NECAP1Q8NC96 275 aa13.75□□□□□ -0.21
DDX55-204ENST00000536079 RRNAD1Q96FB5 475 aaKnown RBP13.75□□□□□ -0.21
DDX55-204ENST00000536079 C7orf50Q9BRJ6 194 aaKnown RBP13.75□□□□□ -0.21
DDX55-204ENST00000536079 MFSD2BA6NFX1 497 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms